RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 GP2P55259 537 aaKnown RBP11.86□□□□□ -0.51
COL3A1-203ENST00000450867 EMX1Q04741 257 aaPredicted RBP11.86□□□□□ -0.51
COL3A1-203ENST00000450867 SCGB2A2Q13296 93 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 IKZF1Q13422 519 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 TRAM1Q15629 374 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 KLF17Q5JT82 389 aaPredicted RBP11.86□□□□□ -0.51
COL3A1-203ENST00000450867 LIPKQ5VXJ0 399 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 FIP1L1Q6UN15 594 aaKnown RBP11.86□□□□□ -0.51
COL3A1-203ENST00000450867 OR5D18Q8NGL1 313 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 NANPQ8TBE9 248 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 PHYHIPQ92561 330 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 EMG1Q92979 244 aaKnown RBP11.86□□□□□ -0.51
COL3A1-203ENST00000450867 SIRPDQ9H106 197 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 METRNQ9UJH8 293 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 SF3B6Q9Y3B4 125 aaKnown RBP11.86□□□□□ -0.51
COL3A1-203ENST00000450867 LRRC42Q9Y546 428 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 KPTNQ9Y664 436 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 MAGEA13PA6NCF6 341 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 K7N7A8 449 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 CHRM2P08172 466 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 UCHL1P09936 223 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 CD37P11049 281 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 ZNF93P35789 620 aaPredicted RBP11.85□□□□□ -0.51
COL3A1-203ENST00000450867 SRP14P37108 136 aaKnown RBP11.85□□□□□ -0.51
COL3A1-203ENST00000450867 PTGFRP43088 359 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 MTNR1BP49286 362 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 CEBPDP49716 269 aaPredicted RBP11.85□□□□□ -0.51
COL3A1-203ENST00000450867 BMXP51813 675 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 KCTD21Q4G0X4 260 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 ACSM3Q53FZ2 586 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 DDI2Q5TDH0 399 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 UBE2UQ5VVX9 321 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 C1orf122Q6ZSJ8 110 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 PHC2Q8IXK0 858 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 SPARTQ8N0X7 666 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 BATF2Q8N1L9 274 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 SVOPQ8N4V2 548 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 TMEM185AQ8NFB2 350 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 OR51T1Q8NGJ9 327 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 NOX4Q9NPH5 578 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 IL36RNQ9UBH0 155 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 OR14J1Q9UGF5 321 aa11.85□□□□□ -0.51
COL3A1-203ENST00000450867 KIAA2026Q5HYC2 2103 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 HAND1O96004 215 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 IFNA2P01563 188 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 TK1P04183 234 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 TMEM225BP0DP42 221 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 PRKACAP17612 351 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 LMO1P25800 156 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 FGF12P61328 243 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 COL10A1Q03692 680 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 INSL4Q14641 139 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 NHLRC3Q5JS37 347 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 TMEM91Q6ZNR0 172 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 C17orf107Q6ZR85 190 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 C9orf139Q6ZV77 190 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 NKAIN3Q8N8D7 197 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 TNFAIP8L1Q8WVP5 186 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 SNX22Q96L94 193 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 WDFY2Q96P53 400 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 TBX15Q96SF7 602 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 GPER1Q99527 375 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 TMED9Q9BVK6 235 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 CNTD2Q9H8S5 307 aa11.84□□□□□ -0.51
COL3A1-203ENST00000450867 UNKLQ9H9P5 680 aaKnown RBP11.84□□□□□ -0.51
COL3A1-203ENST00000450867 TMEM82A0PJX8 343 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 MEGF11A6BM72 1044 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 HSMCR30P0CW71 290 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 NDUFB7P17568 137 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 EPHA1P21709 976 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 GABRA5P31644 462 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 OR3A4PP47883 348 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 SSX1Q16384 188 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 ARMCX4Q5H9R4 360 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 ZNF773Q6PK81 442 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 CD200R1LQ6Q8B3 271 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 METAP1DQ6UB28 335 aaPredicted RBP11.83□□□□□ -0.52
COL3A1-203ENST00000450867 OR8H2Q8N162 312 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 FCGR1BQ92637 280 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 C1orf147Q96MC9 270 aaPredicted RBP11.83□□□□□ -0.52
COL3A1-203ENST00000450867 PPIL3Q9H2H8 161 aaKnown RBP11.83□□□□□ -0.52
COL3A1-203ENST00000450867 NDUFB11Q9NX14 153 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 NUP50Q9UKX7 468 aa11.83□□□□□ -0.52
COL3A1-203ENST00000450867 FBN1P35555 2871 aaKnown RBP11.82□□□□□ -0.52
COL3A1-203ENST00000450867 A0A1W2PPK0 400 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 M0R1W7 72 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 ZNF780AO75290 641 aaPredicted RBP11.82□□□□□ -0.52
COL3A1-203ENST00000450867 INMTO95050 263 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 GALP22466 123 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 BPIFB3P59826 476 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 RPS25P62851 125 aaKnown RBP11.82□□□□□ -0.52
COL3A1-203ENST00000450867 IL13RA2Q14627 380 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 FAM27D1Q5T7N8 215 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 METTL11BQ5VVY1 283 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 Q6P435 159 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 CEACAM19Q7Z692 300 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 LRRTM1Q86UE6 522 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 SATL1Q86VE3 508 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 Q8N7P7 452 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 CHST4Q8NCG5 386 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms