RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 HSD52Q0P140 79 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 DUSP5Q16690 384 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 TMEM255AQ5JRV8 349 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 WDR25Q64LD2 544 aaPredicted RBP1.96□□□□□ -2.09
USP53-202ENST00000450251 LCN15Q6UWW0 184 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 DEFB128Q7Z7B8 93 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 BIVMQ86UB2 503 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 HOGA1Q86XE5 327 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 KLHDC8AQ8IYD2 350 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 C20orf196Q8IYI0 205 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 KIR2DL5AQ8N109 375 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 OR1N1Q8NGS0 311 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 OR10AG1Q8NH19 301 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 SLC25A43Q8WUT9 341 aaPredicted RBP1.96□□□□□ -2.09
USP53-202ENST00000450251 SPACA9Q96E40 222 aaPredicted RBP1.96□□□□□ -2.09
USP53-202ENST00000450251 RCC1LQ96I51 464 aaKnown RBP1.96□□□□□ -2.09
USP53-202ENST00000450251 KCNK15Q9H427 330 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 TAS2R4Q9NYW5 299 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 IL36AQ9UHA7 158 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 EMC9Q9Y3B6 208 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 HDGFL3Q9Y3E1 203 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 A0A1B0GU03 582 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 KLRG2A4D1S0 409 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 C9orf172C9J069 976 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 GFYI3L273 518 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 P2RY10O00398 339 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 HMGN4O00479 90 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 PTGESO14684 152 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RBFOX2O43251 390 aaKnown RBP eCLIP1.96□□□□□ -2.1
USP53-202ENST00000450251 MPDU1O75352 247 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 IGHEP01854 428 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 AMBPP02760 352 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 TYMSP04818 313 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 F13BP05160 661 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 REG1AP05451 166 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 C1QTNF9P0C862 333 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 LYL1P12980 280 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 BLVRBP30043 206 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 ELLP55199 621 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 PCBD1P61457 104 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RPS18P62269 152 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 RHOBP62745 196 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SLC35B1P78383 322 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 COL10A1Q03692 680 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 HYAL1Q12794 435 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 KIAA0040Q15053 153 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ACKR1Q16570 336 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 LRRC10Q5BKY1 277 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 COX20Q5RI15 118 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 FAAP20Q6NZ36 180 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 GLIPR1L1Q6UWM5 242 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SSX8Q7RTT4 187 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 MSRB3Q8IXL7 192 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 C9orf40Q8IXQ3 194 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RNF175Q8N4F7 328 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CYB561D1Q8N8Q1 229 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 AMER3Q8N944 861 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 OR10V1Q8NGI7 309 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 OR4P4Q8NGL7 312 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ORAI2Q96SN7 254 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 GABRG3Q99928 467 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CITED1Q99966 193 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SLC25A2Q9BXI2 301 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SHANK3Q9BYB0 1731 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SMG9Q9H0W8 520 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 OR2D2Q9H210 308 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ISG20L2Q9H9L3 353 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 HES4Q9HCC6 221 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 PLSCR4Q9NRQ2 329 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CD207Q9UJ71 328 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ZNF391Q9UJN7 358 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ZNF346Q9UL40 294 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 ZNF256Q9Y2P7 627 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 RHBDD3Q9Y3P4 386 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 MRPL42Q9Y6G3 142 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 TRAV27A0A087WT01 109 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 A0A087WUU8 490 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 TRBV6-7A0A0A0MS04 114 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 LOC107986453A0A1B0GWG9 222 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 C11orf94C9JXX5 98 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 LDLRAD4O15165 306 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RER1O15258 196 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 LANCL1O43813 399 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 B4GALT3O60512 393 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 F12P00748 615 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 SRP19P09132 144 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 FAM157BP0CG42 384 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RND2P52198 227 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 METAP1P53582 386 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 H2BFSP57053 126 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RIPPLY3P57055 190 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SRSF6Q13247 344 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 SSPNQ14714 243 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 MORN2Q502X0 79 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 DCAF12L2Q5VW00 463 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 LAIR2Q6ISS4 152 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 TMEM91Q6ZNR0 172 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 MRGPREQ86SM8 312 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 FAM219AQ8IW50 185 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms