RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 MIDNQ504T8 468 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 TSPO2Q5TGU0 170 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 RPL7L1Q6DKI1 246 aaKnown RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 SPINK14Q6IE38 97 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 MRPL41Q8IXM3 137 aaKnown RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 GCNT2Q8N0V5 402 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 OR2M3Q8NG83 312 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 APOBEC4Q8WW27 367 aaKnown RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 RGP1Q92546 391 aaPredicted RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 PLPPR2Q96GM1 343 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 SCARF2Q96GP6 870 aaPredicted RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 GPX7Q96SL4 187 aaPredicted RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 EDEM2Q9BV94 578 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 WDR13Q9H1Z4 485 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 ERRFI1Q9UJM3 462 aaPredicted RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 MMP24Q9Y5R2 645 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 TRGV5A0A0B4J1U4 118 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ZNF727A8MUV8 499 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 PATE3B3GLJ2 98 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 PPP1R2P9O14990 202 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 OR8U8P0C7N1 319 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 CA6P23280 308 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ARTNQ5T4W7 220 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 CXorf67Q86X51 503 aaPredicted RBP6.3□□□□□ -1.4
BEST1-202ENST00000449131 LINC00469Q8N7U9 141 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 SLC35G3Q8N808 338 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ZBTB34Q8NCN2 500 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 RPS4Y2Q8TD47 263 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 EAF1Q96JC9 268 aaPredicted RBP6.3□□□□□ -1.4
BEST1-202ENST00000449131 GPR137Q96N19 417 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 UHRF2Q96PU4 802 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 MED9Q9NWA0 146 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 SZT2Q5T011 3432 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 IGKV1D-42A0A075B6H8 117 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 LINC00862A6NCI5 91 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 LINC01387J3KSC0 135 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 CYB5BO43169 146 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 LMX1BO60663 402 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 CRYAAP02489 173 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 GPR12P47775 334 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 H2BFSP57053 126 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 SSX2Q16385 188 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 C2orf68Q2NKX9 166 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ZNF718Q3SXZ3 478 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 SLC25A42Q86VD7 318 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ADAD2Q8NCV1 583 aaKnown RBP6.3□□□□□ -1.4
BEST1-202ENST00000449131 TMEM104Q8NE00 496 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 OR10P1Q8NGE3 313 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 OR5M9Q8NGP3 310 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 KISS1RQ969F8 398 aaPredicted RBP6.3□□□□□ -1.4
BEST1-202ENST00000449131 TECTBQ96PL2 329 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ZNF385AQ96PM9 386 aaKnown RBP6.3□□□□□ -1.4
BEST1-202ENST00000449131 SAMD10Q9BYL1 202 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ESRP2Q9H6T0 727 aaKnown RBP6.3□□□□□ -1.4
BEST1-202ENST00000449131 LIN7CQ9NUP9 197 aaKnown RBP6.3□□□□□ -1.4
BEST1-202ENST00000449131 FBXL17Q9UF56 701 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ANXA10Q9UJ72 324 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ZNF391Q9UJN7 358 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 DOCK4Q8N1I0 1966 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 TRBV5-5A0A0J9YX44 114 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 MDFIC2A0A1B0GVS7 189 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 A0A1W2PP11 408 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 A0A1W2PPH5 198 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 FAM24AA6NFZ4 105 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 SHISA7A6NL88 538 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 IL2RAP01589 272 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 SFTA3P0C7M3 94 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ACKR3P25106 362 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 KCNJ3P48549 501 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 MLF1P58340 268 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 SSPNQ14714 243 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 GUK1Q16774 197 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 RSPO4Q2I0M5 234 aaPredicted RBP6.3□□□□□ -1.4
BEST1-202ENST00000449131 LINC01590Q5TEZ4 76 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ZNF787Q6DD87 383 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 FAHD2BQ6P2I3 314 aaPredicted RBP6.3□□□□□ -1.4
BEST1-202ENST00000449131 C19orf48Q6RUI8 117 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 LINC00518Q8N0U6 118 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 C17orf78Q8N4C9 275 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 BVESQ8NE79 360 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 RPUSD4Q96CM3 377 aaKnown RBP6.3□□□□□ -1.4
BEST1-202ENST00000449131 FAHD2AQ96GK7 314 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 NAA60Q9H7X0 242 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 TMEM9BQ9NQ34 198 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 RPH3ALQ9UNE2 315 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 PROCRQ9UNN8 238 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 TMED3Q9Y3Q3 217 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 H7BYZ3 331 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 KRASP01116 189 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ARG1P05089 322 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 B2MP61769 119 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 RPS16P62249 146 aaKnown RBP6.3□□□□□ -1.4
BEST1-202ENST00000449131 PMP22Q01453 160 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 ZNF816Q0VGE8 651 aaPredicted RBP6.3□□□□□ -1.4
BEST1-202ENST00000449131 DEFB109BQ30KR1 87 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 UQCC3Q6UW78 93 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 IL34Q6ZMJ4 242 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 HIST2H3AQ71DI3 136 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 PIK3IP1Q96FE7 263 aa6.3□□□□□ -1.4
BEST1-202ENST00000449131 C19orf12Q9NSK7 152 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms