RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ZNF35P13682 527 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 ARPC4P59998 168 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 TSC22D1Q15714 1073 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 PIGYQ3MUY2 71 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF718Q3SXZ3 478 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 ATPAF1Q5TC12 328 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 SIGIRRQ6IA17 410 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 TMED4Q7Z7H5 227 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 SLC25A42Q86VD7 318 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 MYPOPQ86VE0 399 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 Q8IYB0 196 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 CISD2Q8N5K1 135 aaKnown RBP9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 NAXEQ8NCW5 288 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 OR10AD1Q8NGE0 317 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 SLAMF9Q96A28 289 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 MUCL1Q96DR8 90 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 PPA2Q9H2U2 334 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 SLC25A15Q9Y619 301 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 LRP5LA4QPB2 252 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 CEACAM18A8MTB9 384 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 ST8SIA5O15466 376 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 OR7C1O76099 320 aaPredicted RBP9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 AGFG2O95081 481 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 CECR9P0C854 216 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 GLI4P10075 376 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 CXCL3P19876 107 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 BCL3P20749 454 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 CA6P23280 308 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 GCH1P30793 250 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 RAP2BP61225 183 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 MZT1Q08AG7 82 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 IL13RA2Q14627 380 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 SURF2Q15527 256 aaPredicted RBP9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 MPPED2Q15777 294 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 SPATA46Q5T0L3 261 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 TMEM211Q6ICI0 200 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 HAGHLQ6PII5 290 aaPredicted RBP9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 SEZ6L2Q6UXD5 910 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 GFRALQ6UXV0 394 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 C3P1Q6ZMU1 363 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 SSX8Q7RTT4 187 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 RTN4RL2Q86UN3 420 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 SPERTQ8NA61 448 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 OR2AK2Q8NG84 335 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 ZFAND1Q8TCF1 268 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 CAPSLQ8WWF8 208 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 SLX1AQ9BQ83 275 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 FAAP24Q9BTP7 215 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 DLL4Q9NR61 685 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 EHFQ9NZC4 300 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 AK3Q9UIJ7 227 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 SPEF1Q9Y4P9 236 aa9.04□□□□□ -0.96
VIPAS39-203ENST00000448935 INTS1Q8N201 2190 aaKnown RBP9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 GLAP06280 429 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 FPR2P25090 351 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 NPBWR2P48146 333 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 PSG7Q13046 419 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 OR8G1Q15617 311 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 SRSF7Q16629 238 aaKnown RBP eCLIP9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 FAM76BQ5HYJ3 339 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 LPCAT3Q6P1A2 487 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 OVCH2Q7RTZ1 564 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 MRGPRGQ86SM5 289 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 MUC20Q8N307 709 aaPredicted RBP9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 C12orf45Q8N5I9 185 aaPredicted RBP9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 Q8NA96 180 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 KLF14Q8TD94 323 aaPredicted RBP9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 MARS2Q96GW9 593 aaKnown RBP9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 CCDC120Q96HB5 630 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 SULT4A1Q9BR01 284 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 ADAT1Q9BUB4 502 aaKnown RBP9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 C1QTNF6Q9BXI9 259 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 FGF23Q9GZV9 251 aaPredicted RBP9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 OR51I2Q9H344 312 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF442Q9H7R0 627 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF286AQ9HBT8 521 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 C12orf4Q9NQ89 552 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 TMEM100Q9NV29 134 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 NECAP2Q9NVZ3 263 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 MTCH1Q9NZJ7 389 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF629Q9UEG4 869 aaPredicted RBP9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 ANXA10Q9UJ72 324 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF835Q9Y2P0 537 aa9.03□□□□□ -0.96
VIPAS39-203ENST00000448935 URB1O60287 2271 aaKnown RBP9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 IGHV2OR16-5A0A0B4J2B6 119 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 IGHV1-18A0A0C4DH31 117 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 OR2A4O95047 310 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 HLA-AP01891 365 aaKnown RBP9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 FCGR3AP08637 254 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 KITLGP21583 273 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 DNASE1P24855 282 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 RBM39Q14498 530 aaKnown RBP9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 MBNL2Q5VZF2 373 aaKnown RBP9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 LIN54Q6MZP7 749 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 C11orf88Q6PI97 169 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF474Q6S9Z5 364 aaPredicted RBP9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 LYG2Q86SG7 212 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 LHFPL1Q86WI0 220 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 DOLPP1Q86YN1 238 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 OR8G5Q8NG78 346 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms