RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 R4GMQ9 66 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 MDP1Q86V88 176 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 SMIM4Q8WVI0 70 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 TWSG1Q9GZX9 223 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 IL19Q9UHD0 177 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 EPHA8P29322 1005 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-202ENST00000448238 YPEL5P62699 121 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 ECM1Q16610 540 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 CLEC18BQ6UXF7 455 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 VKORC1L1Q8N0U8 176 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 SYS1Q8N2H4 156 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 APOOQ9BUR5 198 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 S1PR2O95136 353 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 MT-CO3P00414 261 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 WNT5AP41221 380 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 PRDX1Q06830 199 aaKnown RBP8.03□□□□□ -1.12
NIPBL-202ENST00000448238 GGTA1PQ4G0N0 100 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 RTN4RL1Q86UN2 441 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-202ENST00000448238 OR10J6PQ8NGY7 276 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 ROBO4Q8WZ75 1007 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 APOBEC3DQ96AK3 386 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-202ENST00000448238 DPH3P1Q9H4G8 78 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 SPANXCQ9NY87 97 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 ANKRD26Q9UPS8 1709 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 CEP170Q5SW79 1584 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 A0A1B0GWA3 101 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 OR11H12B2RN74 326 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 RAC3P60763 192 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 GNG3P63215 75 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 OR11H1Q8NG94 326 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 OR11H2Q8NH07 326 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 RARRES2Q99969 163 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 APOBEC3GQ9HC16 384 aaKnown RBP8.03□□□□□ -1.12
NIPBL-202ENST00000448238 NFAT5O94916 1531 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 hADV38S2A0JD32 116 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 LINC01387J3KSC0 135 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 DSCR3O14972 297 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 MFAP2P55001 183 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 ABHD17CQ6PCB6 329 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 ANKRD37Q7Z713 158 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 SSBP4Q9BWG4 385 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-202ENST00000448238 KCNE5Q9UJ90 142 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 ADGRB1O14514 1584 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 CD3DP04234 171 aa8.02□□□□□ -1.12
NIPBL-202ENST00000448238 ELNP15502 786 aa8.02□□□□□ -1.12
NIPBL-202ENST00000448238 PYCR3Q53H96 274 aa8.02□□□□□ -1.12
NIPBL-202ENST00000448238 PRSS54Q6PEW0 395 aa8.02□□□□□ -1.12
NIPBL-202ENST00000448238 DNASE2BQ8WZ79 361 aa8.02□□□□□ -1.12
NIPBL-202ENST00000448238 ZNF775Q96BV0 537 aaPredicted RBP8.02□□□□□ -1.12
NIPBL-202ENST00000448238 SPANXDQ9BXN6 97 aa8.02□□□□□ -1.12
NIPBL-202ENST00000448238 ALX4Q9H161 411 aaPredicted RBP8.02□□□□□ -1.12
NIPBL-202ENST00000448238 Q9Y3F1 56 aa8.02□□□□□ -1.12
NIPBL-202ENST00000448238 MYO16Q9Y6X6 1858 aa8.02□□□□□ -1.12
NIPBL-202ENST00000448238 NRXN1Q9ULB1 1477 aa8.02□□□□□ -1.12
NIPBL-202ENST00000448238 A0A1W2PS18 150 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 NKX2-8O15522 239 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 SFTPCP11686 197 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 KLRK1P26718 216 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 BTG2P78543 158 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 RUNX3Q13761 415 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 TMEM78Q5T7P6 136 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 SLC25A26Q70HW3 274 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF683Q8IZ20 524 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 OR2Y1Q8NGV0 311 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF707Q96C28 371 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-202ENST00000448238 ANKRD20A5PA0PJZ0 165 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 A1L4Q6 167 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 LGALSLQ3ZCW2 172 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-202ENST00000448238 AWAT1Q58HT5 328 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 GLDNQ6ZMI3 551 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-202ENST00000448238 DEFB108BQ8NET1 73 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 C16orf92Q96LL3 132 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 OXGR1Q96P68 337 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 MS4A6AQ9H2W1 248 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 NTNG1Q9Y2I2 539 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 ACACAQ13085 2346 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 WNT9BO14905 357 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 SRSF10O75494 262 aaKnown RBP8.02□□□□□ -1.13
NIPBL-202ENST00000448238 ADRA2AP08913 450 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 CNTFRP26992 372 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 SCAND1P57086 179 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 HOXC5Q00444 222 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 SELENBP1Q13228 472 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 TCEAL1Q15170 157 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 NCMAPQ5T1S8 102 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 SAXO2Q658L1 398 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 HTR3DQ70Z44 454 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 RSRP1Q9BUV0 290 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 CDCA4Q9BXL8 241 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 KLF13Q9Y2Y9 288 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-202ENST00000448238 HPXP02790 462 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 PCMT1P22061 227 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 DDTP30046 118 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 DAPP51397 102 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 VWA2Q5GFL6 755 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 ABHD3Q8WU67 409 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 ST8SIA1Q92185 356 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 ZIC5Q96T25 663 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 CLN8Q9UBY8 286 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 CLDN16Q9Y5I7 305 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms