RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 SYNGR1O43759 233 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 SMPD2O60906 423 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 PDCD6O75340 191 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 CA11O75493 328 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 KNG1P01042 644 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 FCGR3AP08637 254 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 HOXD4P09016 255 aaPredicted RBP8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 PRKACAP17612 351 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 FUT3P21217 361 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 MPPED2Q15777 294 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 INO80CQ6PI98 192 aaPredicted RBP8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 CXorf67Q86X51 503 aaPredicted RBP8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 MKXQ8IYA7 352 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 CCDC36Q8IYA8 594 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 OR1J1Q8NGS3 322 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 SCGB3A2Q96PL1 93 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 CLEC4MQ9H2X3 399 aaPredicted RBP8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 CHMP1AQ9HD42 196 aaPredicted RBP8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 PRR13Q9NZ81 148 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 BOD1L1Q8NFC6 3051 aa8.17□□□□□ -1.1
COL6A4P1-201ENST00000446690 TNRC6AQ8NDV7 1962 aaKnown RBP8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 MUC6Q6W4X9 2439 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 CXCL2P19875 107 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 UCP2P55851 309 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 TAS2R31P59538 309 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 GMFBP60983 142 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 TMEM128Q5BJH2 165 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 CLLU1Q5K131 121 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 LY6G6FQ5SQ64 297 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 NSUN5P2Q63ZY6 315 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 FAHD2BQ6P2I3 314 aaPredicted RBP8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 SLC25A40Q8TBP6 338 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 NEK7Q8TDX7 302 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 MITD1Q8WV92 249 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 STARD4Q96DR4 205 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 FAHD2AQ96GK7 314 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 RTBDNQ9BSG5 229 aaPredicted RBP8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 SCNM1Q9BWG6 230 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 PLSCR4Q9NRQ2 329 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 EDARQ9UNE0 448 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 OSGIN2Q9Y236 505 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 MPC1Q9Y5U8 109 aa8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 PRRC2CQ9Y520 2896 aaKnown RBP8.16□□□□□ -1.1
COL6A4P1-201ENST00000446690 C5orf51A6NDU8 294 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 EEF1E1-BLOC1S5C9J1V9 151 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 PROB1E7EW31 1015 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 MKRN2OSH3BPM6 223 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 WDR1O75083 606 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 TNFSF13O75888 250 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 CNOT4O95628 575 aaKnown RBP8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 IL2RAP01589 272 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 OR5H8P0DN80 308 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 PPP3CBP16298 524 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 FPR2P25090 351 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 EIF2S3P41091 472 aaKnown RBP8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 SEC61A1P61619 476 aaKnown RBP8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 GNG3P63215 75 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 SLC22A25Q6T423 547 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 SEM1Q6ZVN7 128 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 LHFPL1Q86WI0 220 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 RPRMLQ8N4K4 120 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 OR5M8Q8NGP6 311 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 PCNPQ8WW12 178 aaKnown RBP8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 ABHD17AQ96GS6 310 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 NECAP2Q9NVZ3 263 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 LHX6Q9UPM6 363 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 DOCK7Q96N67 2140 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 MCRIP1C9JLW8 97 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 M0R233 179 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 HS3ST1O14792 307 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 RHBDL1O75783 438 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 DUS4LO95620 317 aaKnown RBP8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 RRASP10301 218 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 CBR1P16152 277 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 DTYMKP23919 212 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 CALCRP30988 508 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 FGF12P61328 243 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 EXOSC2Q13868 293 aaKnown RBP8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 ALKBH6Q3KRA9 238 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 CLEC18BQ6UXF7 455 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 ZNF573Q86YE8 665 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 C17orf78Q8N4C9 275 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 WDR31Q8NA23 367 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 TOMM40LQ969M1 308 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 TMEM230Q96A57 120 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 COMMD9Q9P000 198 aa8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 C14orf166Q9Y224 244 aaKnown RBP8.15□□□□□ -1.1
COL6A4P1-201ENST00000446690 MED12LQ86YW9 2145 aa8.15□□□□□ -1.11
COL6A4P1-201ENST00000446690 ARHGAP21Q5T5U3 1957 aa8.15□□□□□ -1.11
COL6A4P1-201ENST00000446690 PTPRZ1P23471 2315 aaPredicted RBP8.14□□□□□ -1.11
COL6A4P1-201ENST00000446690 TOR1AO14656 332 aa8.14□□□□□ -1.11
COL6A4P1-201ENST00000446690 RGS11O94810 467 aa8.14□□□□□ -1.11
COL6A4P1-201ENST00000446690 MPC2O95563 127 aa8.14□□□□□ -1.11
COL6A4P1-201ENST00000446690 CRYABP02511 175 aaKnown RBP8.14□□□□□ -1.11
COL6A4P1-201ENST00000446690 FXYD4P59646 89 aa8.14□□□□□ -1.11
COL6A4P1-201ENST00000446690 OPCMLQ14982 345 aa8.14□□□□□ -1.11
COL6A4P1-201ENST00000446690 SAXO1Q8IYX7 474 aa8.14□□□□□ -1.11
COL6A4P1-201ENST00000446690 TMEM185AQ8NFB2 350 aa8.14□□□□□ -1.11
COL6A4P1-201ENST00000446690 EXTL1Q92935 676 aa8.14□□□□□ -1.11
COL6A4P1-201ENST00000446690 WDR13Q9H1Z4 485 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms