RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 OR13H1Q8NG92 308 aa12.18□□□□□ -0.46
VPS52-212ENST00000445902 OR5R1Q8NH85 324 aa12.18□□□□□ -0.46
VPS52-212ENST00000445902 THAP3Q8WTV1 239 aaPredicted RBP12.18□□□□□ -0.46
VPS52-212ENST00000445902 NDUFAF3Q9BU61 184 aa12.18□□□□□ -0.46
VPS52-212ENST00000445902 SIRT7Q9NRC8 400 aa12.18□□□□□ -0.46
VPS52-212ENST00000445902 EYSQ5T1H1 3165 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 TRIOO75962 3097 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 ZFP92A6NM28 416 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 MKRN2OSH3BPM6 223 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 EFNA3P52797 238 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 FOXO1Q12778 655 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 TCEAL6Q6IPX3 200 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 LIAT1Q6ZQX7 453 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 YAF2Q8IY57 180 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 OR13D1Q8NGV5 346 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 NKX2-6A6NCS4 301 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 TMEM150CB9EJG8 249 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 TSPAN2O60636 221 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 IL18BPO95998 194 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 CLRN1P58418 232 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 JOSD1Q15040 202 aaPredicted RBP12.17□□□□□ -0.46
VPS52-212ENST00000445902 CALHM2Q9HA72 323 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 TRANK1O15050 2925 aa12.17□□□□□ -0.46
VPS52-212ENST00000445902 SDK1Q7Z5N4 2213 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 ASXL3Q9C0F0 2248 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.16□□□□□ -0.46
VPS52-212ENST00000445902 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.16□□□□□ -0.46
VPS52-212ENST00000445902 IFNL4K9M1U5 179 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 KLF8O95600 359 aaPredicted RBP12.16□□□□□ -0.46
VPS52-212ENST00000445902 CD55P08174 381 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 HOXB2P14652 356 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 KIR2DL1P43626 348 aaPredicted RBP12.16□□□□□ -0.46
VPS52-212ENST00000445902 GABREP78334 506 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 PDCD1Q15116 288 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 PPA1Q15181 289 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 CLDND2Q8NHS1 167 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 C18orf12Q96KH6 178 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 CABLES2Q9BTV7 478 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 SMDT1Q9H4I9 107 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 GLRX2Q9NS18 164 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 GAB2Q9UQC2 676 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 KIAA0100Q14667 2235 aaKnown RBP12.16□□□□□ -0.46
VPS52-212ENST00000445902 A0A1B0GWJ7 208 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 IGKV3-11P04433 115 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 PGA3P0DJD8 388 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 HNRNPA2B1P22626 353 aaKnown RBP12.16□□□□□ -0.46
VPS52-212ENST00000445902 ZNF266Q14584 549 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 MPV17LQ2QL34 196 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 LRP11Q86VZ4 500 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 OR4X1Q8NH49 305 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 MSI2Q96DH6 328 aaKnown RBP12.16□□□□□ -0.46
VPS52-212ENST00000445902 WFIKKN1Q96NZ8 548 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 TP53RKQ96S44 253 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 CHST11Q9NPF2 352 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 LANCL2Q9NS86 450 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 LRP4O75096 1905 aa12.16□□□□□ -0.46
VPS52-212ENST00000445902 F5H5K5 113 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 SPRY1O43609 319 aaPredicted RBP12.15□□□□□ -0.46
VPS52-212ENST00000445902 HSPB1P04792 205 aaKnown RBP12.15□□□□□ -0.46
VPS52-212ENST00000445902 PAX1P15863 534 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 DYNLT3P51808 116 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 TNFRSF9Q07011 255 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 LBHQ53QV2 105 aaPredicted RBP12.15□□□□□ -0.46
VPS52-212ENST00000445902 ZNF506Q5JVG8 444 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 SHISA6Q6ZSJ9 500 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 SLC35E3Q7Z769 313 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 CMTM1Q8IZ96 169 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 LGI3Q8N145 548 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 SLC22A18ASQ8N1D0 253 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 PGAM5Q96HS1 289 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 LYZL4Q96KX0 146 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 PNLIPP16233 465 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 RNF4P78317 190 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 COL10A1Q03692 680 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 P2RY6Q15077 328 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 FAM189A2Q15884 450 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 LANCL3Q6ZV70 420 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 DOK3Q7L591 496 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 SERINC1Q9NRX5 453 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 PITPNC1Q9UKF7 332 aa12.15□□□□□ -0.46
VPS52-212ENST00000445902 SHISA7A6NL88 538 aa12.15□□□□□ -0.47
VPS52-212ENST00000445902 CLDN34H7C241 214 aa12.15□□□□□ -0.47
VPS52-212ENST00000445902 ECI1P42126 302 aa12.15□□□□□ -0.47
VPS52-212ENST00000445902 ALDH3B1P43353 468 aa12.15□□□□□ -0.47
VPS52-212ENST00000445902 FGF8P55075 233 aaPredicted RBP12.15□□□□□ -0.47
VPS52-212ENST00000445902 CD81P60033 236 aa12.15□□□□□ -0.47
VPS52-212ENST00000445902 CXorf66Q5JRM2 361 aaPredicted RBP12.15□□□□□ -0.47
VPS52-212ENST00000445902 TMEM183AQ8IXX5 376 aa12.15□□□□□ -0.47
VPS52-212ENST00000445902 BATF2Q8N1L9 274 aa12.15□□□□□ -0.47
VPS52-212ENST00000445902 SSC4DQ8WTU2 575 aa12.15□□□□□ -0.47
VPS52-212ENST00000445902 WWTR1Q9GZV5 400 aa12.15□□□□□ -0.47
VPS52-212ENST00000445902 CBLN4Q9NTU7 201 aa12.15□□□□□ -0.47
VPS52-212ENST00000445902 NECAP2Q9NVZ3 263 aa12.15□□□□□ -0.47
VPS52-212ENST00000445902 A0A1W2PQF6 199 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 OR4A8P0C604 315 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 FBXW4P57775 412 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 ZNF154Q13106 437 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 DNLZQ5SXM8 178 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 SNHG12Q9BXW3 62 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 C8orf33Q9H7E9 229 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms