RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 K7EPK0 472 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 PMELP40967 661 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 NPBWR2P48146 333 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 FXYD4P59646 89 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 EIF5AP63241 154 aaKnown RBP13.81□□□□□ -0.2
SHQ1-202ENST00000444040 SRYQ05066 204 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 MALLQ13021 153 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 FAM71E2Q8N5Q1 922 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 PCDHB16Q9NRJ7 776 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 SLC2A9Q9NRM0 540 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 FOXJ2Q9P0K8 574 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 ZNF629Q9UEG4 869 aaPredicted RBP13.81□□□□□ -0.2
SHQ1-202ENST00000444040 DOCK10Q96BY6 2186 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 A0A1W2PNU3 283 aaPredicted RBP13.81□□□□□ -0.2
SHQ1-202ENST00000444040 RPL36A-HNRNPH2H7BZ11 118 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 GPR31O00270 319 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 LRP3O75074 770 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 JMJD7P0C870 316 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 FUT3P21217 361 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 PJVKQ0ZLH3 352 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 TMEM211Q6ICI0 200 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 IL34Q6ZMJ4 242 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 SLC25A26Q70HW3 274 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 PUSL1Q8N0Z8 303 aaKnown RBP13.81□□□□□ -0.2
SHQ1-202ENST00000444040 MOB3AQ96BX8 217 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 TSNAXQ99598 290 aaKnown RBP13.81□□□□□ -0.2
SHQ1-202ENST00000444040 REPIN1Q9BWE0 567 aaKnown RBP13.81□□□□□ -0.2
SHQ1-202ENST00000444040 PARPBPQ9NWS1 579 aa13.81□□□□□ -0.2
SHQ1-202ENST00000444040 CST4P01036 141 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 FOXG1P55316 489 aaPredicted RBP13.8□□□□□ -0.2
SHQ1-202ENST00000444040 UCP3P55916 312 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 GUCA2BQ16661 112 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 ABCA11PQ4W5N1 156 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 TUSC5Q8IXB3 177 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 SUCNR1Q9BXA5 334 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 PLA2G2EQ9NZK7 142 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 FBXL17Q9UF56 701 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 LSM5Q9Y4Y9 91 aaKnown RBP13.8□□□□□ -0.2
SHQ1-202ENST00000444040 SMCO1Q147U7 214 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 PHLDA2Q53GA4 152 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 CDCP2Q5VXM1 449 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 LYZL2Q7Z4W2 148 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 GLYATL2Q8WU03 294 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 MSI2Q96DH6 328 aaKnown RBP13.8□□□□□ -0.2
SHQ1-202ENST00000444040 POM121Q96HA1 1249 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 C18orf12Q96KH6 178 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 FGF23Q9GZV9 251 aaPredicted RBP13.8□□□□□ -0.2
SHQ1-202ENST00000444040 CARHSP1Q9Y2V2 147 aaKnown RBP13.8□□□□□ -0.2
SHQ1-202ENST00000444040 STARD10Q9Y365 291 aa13.8□□□□□ -0.2
SHQ1-202ENST00000444040 A0A096LPE4 126 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 A0A1W2PPZ6 126 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 PQLC2LA1A4F0 135 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 MBPP02686 304 aaPredicted RBP13.79□□□□□ -0.2
SHQ1-202ENST00000444040 GAPDHP04406 335 aaKnown RBP13.79□□□□□ -0.2
SHQ1-202ENST00000444040 CTRB1P17538 263 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 MPLP40238 635 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 TMEM33P57088 247 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 C9orf135Q5VTT2 229 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 CTRB2Q6GPI1 263 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 EIF5AL1Q6IS14 154 aaKnown RBP13.79□□□□□ -0.2
SHQ1-202ENST00000444040 SVBPQ8N300 66 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 OR56B2PQ8NGI1 322 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 ZC4H2Q9NQZ6 224 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 CRIM1Q9NZV1 1036 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 ZNF503-AS2A6NEH8 195 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 ZNHIT1O43257 154 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 OR7C1O76099 320 aaPredicted RBP13.79□□□□□ -0.2
SHQ1-202ENST00000444040 LPAR6P43657 344 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 SULT1A2P50226 295 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 ABHD17BQ5VST6 288 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 LIAT1Q6ZQX7 453 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 BATF2Q8N1L9 274 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 CLRN3Q8NCR9 226 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 WNT2BQ93097 391 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 PRRG4Q9BZD6 226 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 ARRDC1-AS1Q9H2J1 176 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 ZNF442Q9H7R0 627 aa13.79□□□□□ -0.2
SHQ1-202ENST00000444040 H7C1Q1 480 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 HLA-HP01893 362 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 ZNF169Q14929 603 aaPredicted RBP13.78□□□□□ -0.2
SHQ1-202ENST00000444040 OR11L1Q8NGX0 322 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 RSRP1Q9BUV0 290 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 TLNRD1Q9H1K6 362 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 HRH4Q9H3N8 390 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 UQCC1Q9NVA1 299 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 PURGQ9UJV8 347 aaKnown RBP13.78□□□□□ -0.2
SHQ1-202ENST00000444040 WDFY4Q6ZS81 3184 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 JTBO76095 146 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 CCL2P13500 99 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 MAGEA5P43359 124 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 FAM122CQ6P4D5 195 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 OR5L1Q8NGL2 311 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 HPSE2Q8WWQ2 592 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 TTTY12Q9BZ98 90 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 TMEM231Q9H6L2 316 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 CALHM2Q9HA72 323 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 PLEKHA2Q9HB19 425 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 B4GALT7Q9UBV7 327 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 ZDBF2Q9HCK1 2354 aa13.78□□□□□ -0.2
SHQ1-202ENST00000444040 F8W036 122 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms