RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 M0QZK8 103 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 GYG2O15488 501 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 HAND1O96004 215 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 PF4V1P10720 104 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 PRKACBP22694 351 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 PAX6P26367 422 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 CEACAM3P40198 252 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 RBP2P50120 134 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 ATP1B3P54709 279 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 SLC35A2P78381 396 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 HABP2Q14520 560 aaPredicted RBP11.1□□□□□ -0.63
PTPRE-203ENST00000442830 ZNF146Q15072 292 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 GRK1Q15835 563 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 OXLD1Q5BKU9 147 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 FAM220AQ7Z4H9 259 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 CATSPERDQ86XM0 798 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 DYNAPQ8N1N2 210 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 TCEANCQ8N8B7 351 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 WFDC9Q8NEX5 89 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 OR4X2Q8NGF9 303 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 RCC1LQ96I51 464 aaKnown RBP11.1□□□□□ -0.63
PTPRE-203ENST00000442830 AURKAIP1Q9NWT8 199 aaPredicted RBP11.1□□□□□ -0.63
PTPRE-203ENST00000442830 MTCH1Q9NZJ7 389 aa11.1□□□□□ -0.63
PTPRE-203ENST00000442830 TSSC4Q9Y5U2 329 aaPredicted RBP11.1□□□□□ -0.63
PTPRE-203ENST00000442830 KIAA2026Q5HYC2 2103 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 TRGV10A0A0A0MS01 117 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 METTL15A6NJ78 407 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 PF4P02776 101 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 GABRR1P24046 479 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 RAB13P51153 203 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 DAPP51397 102 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 GYS2P54840 703 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 EFNB1P98172 346 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 CD83Q01151 205 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 ZNF91Q05481 1191 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 DCTN2Q13561 401 aaKnown RBP11.09□□□□□ -0.63
PTPRE-203ENST00000442830 EDDM3AQ14507 147 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 C12orf73Q69YU5 71 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 CCDC144NLQ6NUI1 221 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 PLEKHG7Q6ZR37 379 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 LHFPL2Q6ZUX7 228 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 SLC25A26Q70HW3 274 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 TRAPPC6BQ86SZ2 158 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 LYG1Q8N1E2 194 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 OR5AU1Q8NGC0 362 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 RFKQ969G6 155 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 SLAMF9Q96A28 289 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 MYCBPQ99417 103 aaPredicted RBP11.09□□□□□ -0.63
PTPRE-203ENST00000442830 CADM1Q9BY67 442 aaKnown RBP11.09□□□□□ -0.63
PTPRE-203ENST00000442830 PCDHB16Q9NRJ7 776 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 TAS2R3Q9NYW6 316 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 DPM3Q9P2X0 92 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 HILPDAQ9Y5L2 63 aa11.09□□□□□ -0.63
PTPRE-203ENST00000442830 ADARB2-AS1A8MUL3 147 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 OOSP1A8MZH6 123 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 G3V2T6 193 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 SH2D1BO14796 132 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 RPP14O95059 124 aaKnown RBP11.08□□□□□ -0.64
PTPRE-203ENST00000442830 PRB2P02812 416 aaPredicted RBP11.08□□□□□ -0.64
PTPRE-203ENST00000442830 RPSAP08865 295 aaKnown RBP11.08□□□□□ -0.64
PTPRE-203ENST00000442830 HTR1FP30939 366 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 ATP6V1E1P36543 226 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 BDH1Q02338 343 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 UBE2V2Q15819 145 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 TMEM244Q5VVB8 128 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 UTS2BQ765I0 119 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 CENPVQ7Z7K6 275 aaPredicted RBP11.08□□□□□ -0.64
PTPRE-203ENST00000442830 ZDHHC13Q8IUH4 622 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 FAM58AQ8N1B3 248 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 STMN2Q93045 179 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 SPSB1Q96BD6 273 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 OCSTAMPQ9BR26 566 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 POMPQ9Y244 141 aa11.08□□□□□ -0.64
PTPRE-203ENST00000442830 TMEM82A0PJX8 343 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 A6NIN4 97 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 LEUTXA8MZ59 168 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 OR2F2O95006 317 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 OCM2P0CE71 109 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 OCMP0CE72 109 aaPredicted RBP11.07□□□□□ -0.64
PTPRE-203ENST00000442830 FCGR1AP12314 374 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 CD34P28906 385 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 P2RX3P56373 397 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 FOXB2Q5VYV0 432 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 KDM4DQ6B0I6 523 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 HEPN1Q6WQI6 88 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 TCF23Q7RTU1 214 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 KCTD20Q7Z5Y7 419 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 BATF2Q8N1L9 274 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 CHST4Q8NCG5 386 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 DPF1Q92782 380 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 UTP4Q969X6 686 aaKnown RBP11.07□□□□□ -0.64
PTPRE-203ENST00000442830 IL4I1Q96RQ9 567 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 OSBPL10Q9BXB5 764 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 GABARAPL1Q9H0R8 117 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 EXOSC4Q9NPD3 245 aaKnown RBP11.07□□□□□ -0.64
PTPRE-203ENST00000442830 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTPRE-203ENST00000442830 ZMAT5Q9UDW3 170 aaKnown RBP11.07□□□□□ -0.64
PTPRE-203ENST00000442830 DNAH3Q8TD57 4116 aa11.07□□□□□ -0.64
PTPRE-203ENST00000442830 IGKV1-27A0A075B6S5 117 aa11.06□□□□□ -0.64
PTPRE-203ENST00000442830 LOC107986453A0A1B0GWG9 222 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms