RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 IL18R1Q13478 541 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 TP53I3Q53FA7 332 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 MINOS1Q5TGZ0 78 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 CRIP3Q6Q6R5 217 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 LHFPL2Q6ZUX7 228 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 FAM58AQ8N1B3 248 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 C11orf42Q8N5U0 333 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 DNAAF1Q8NEP3 725 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 OR11H6Q8NGC7 330 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 CENPNQ96H22 339 aaPredicted RBP9.53□□□□□ -0.88
TTC28-203ENST00000442232 OSBPL10Q9BXB5 764 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 OAZ3Q9UMX2 235 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 SESN1Q9Y6P5 492 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 MINOS1-NBL1R4GNA1 71 aa9.53□□□□□ -0.88
TTC28-203ENST00000442232 PLXNB1O43157 2135 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 IGKV1-27A0A075B6S5 117 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 TRBV2A0A0J9YWF9 115 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 DAPL1A0PJW8 107 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 FAM90A8PA6NJQ4 464 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 SNTNA6NMZ2 147 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 HTR1AP08908 422 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 SNU13P55769 128 aaKnown RBP9.52□□□□□ -0.89
TTC28-203ENST00000442232 MTCP1P56278 107 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 ZNF91Q05481 1191 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 NSUN5P1Q3KNT7 163 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 SPIN3Q5JUX0 258 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 KCTD20Q7Z5Y7 419 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 TMEM219Q86XT9 240 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 PRSS35Q8N3Z0 413 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 CFHR4Q92496 578 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 CLEC7AQ9BXN2 247 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 CHST6Q9GZX3 395 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 GAL3ST2Q9H3Q3 398 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 ZNF702PQ9H963 129 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 EXOSC4Q9NPD3 245 aaKnown RBP9.52□□□□□ -0.89
TTC28-203ENST00000442232 RBFOX1Q9NWB1 397 aaKnown RBP9.52□□□□□ -0.89
TTC28-203ENST00000442232 HILPDAQ9Y5L2 63 aa9.52□□□□□ -0.89
TTC28-203ENST00000442232 TRGV10A0A0A0MS01 117 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 IGHV2-26A0A0B4J1V2 119 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 MEGF11A6BM72 1044 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 A6NDX4 124 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 F8VVB4 439 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 F8VWA3 439 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 SIRPB1O00241 398 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 SH2D1BO14796 132 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 MGST3O14880 152 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 XPNPEP2O43895 674 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 ATF1P18846 271 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 BCL3P20749 454 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 AZGP1P25311 298 aaKnown RBP9.51□□□□□ -0.89
TTC28-203ENST00000442232 VDAC2P45880 294 aaPredicted RBP9.51□□□□□ -0.89
TTC28-203ENST00000442232 RAB13P51153 203 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 DYNLT3P51808 116 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 EMX1Q04741 257 aaPredicted RBP9.51□□□□□ -0.89
TTC28-203ENST00000442232 OR52W1Q6IF63 320 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 UTS2BQ765I0 119 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 OR4F17Q8NGA8 305 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 OR13C3Q8NGS6 347 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 OR2G2Q8NGZ5 317 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 PIFOQ8TCI5 191 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 TRUB1Q8WWH5 349 aaKnown RBP9.51□□□□□ -0.89
TTC28-203ENST00000442232 EME1Q96AY2 570 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 SPSB1Q96BD6 273 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 RNFT2Q96EX2 444 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 AKR1E2Q96JD6 320 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 OPALINQ96PE5 141 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 OR4F4Q96R69 305 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 TMEM133Q9H2Q1 129 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 SEBOXQ9HB31 216 aaPredicted RBP9.51□□□□□ -0.89
TTC28-203ENST00000442232 GSTK1Q9Y2Q3 226 aa9.51□□□□□ -0.89
TTC28-203ENST00000442232 UBE2J1Q9Y385 318 aaPredicted RBP9.51□□□□□ -0.89
TTC28-203ENST00000442232 TMEM82A0PJX8 343 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 G3V4G9 280 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 ENTPD6O75354 484 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 IGHA1P01876 353 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 HTR1DP28221 377 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 DUSP1P28562 367 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 BRS3P32247 399 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 POLR2IP36954 125 aaKnown RBP9.5□□□□□ -0.89
TTC28-203ENST00000442232 KIR3DL2P43630 455 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 P2RX3P56373 397 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 ZNF85Q03923 595 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 HABP2Q14520 560 aaPredicted RBP9.5□□□□□ -0.89
TTC28-203ENST00000442232 ZNF146Q15072 292 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 MEDAGQ5VYS4 303 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 NDUFA11Q86Y39 141 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 RDH10Q8IZV5 341 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 DYNAPQ8N1N2 210 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 Q8N2B8 174 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 TPRX1Q8N7U7 411 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 ZNF596Q8TC21 504 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 FGGYQ96C11 551 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 R3HDM4Q96D70 268 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 ADAT3Q96EY9 351 aaPredicted RBP9.5□□□□□ -0.89
TTC28-203ENST00000442232 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.5□□□□□ -0.89
TTC28-203ENST00000442232 IL36RNQ9UBH0 155 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 HHLA2Q9UM44 414 aa9.5□□□□□ -0.89
TTC28-203ENST00000442232 SLC16A6O15403 523 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 ISG15P05161 165 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 RPSAP08865 295 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms