RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CCDC71LQ8N9Z2 235 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 OR2AK2Q8NG84 335 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 CAPSLQ8WWF8 208 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 GTF3AQ92664 365 aaKnown RBP5.16□□□□□ -1.58
VPS50-205ENST00000441602 MARS2Q96GW9 593 aaKnown RBP5.16□□□□□ -1.58
VPS50-205ENST00000441602 FAAP24Q9BTP7 215 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 ASF1BQ9NVP2 202 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 ANXA10Q9UJ72 324 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 ZFHX2Q9C0A1 2572 aaPredicted RBP5.16□□□□□ -1.58
VPS50-205ENST00000441602 ARHGAP21Q5T5U3 1957 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 PRUNE2Q8WUY3 3088 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 F5H5P2 479 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 WISP2O76076 250 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 TOXO94900 526 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 SFTPBP07988 381 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 FCGR3AP08637 254 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 ACAA1P09110 424 aaPredicted RBP5.16□□□□□ -1.58
VPS50-205ENST00000441602 ZNF44P15621 663 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 VAMP1P23763 118 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 KLF3P57682 345 aaPredicted RBP5.16□□□□□ -1.58
VPS50-205ENST00000441602 PSG7Q13046 419 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 SPIN3Q5JUX0 258 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 CALHM1Q8IU99 346 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 Q8NA96 180 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 OR10AD1Q8NGE0 317 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 OR4D10Q8NGI6 311 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 VRK1Q99986 396 aaPredicted RBP5.16□□□□□ -1.58
VPS50-205ENST00000441602 COQ3Q9NZJ6 369 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 SH3BGRL2Q9UJC5 107 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 CEP250Q9BV73 2442 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 A0A0B4J2A0 478 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 WIPF3A6NGB9 483 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 SLC22A5O76082 557 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 RGS11O94810 467 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 HLA-AP01891 365 aaKnown RBP5.15□□□□□ -1.58
VPS50-205ENST00000441602 OR5H8P0DN80 308 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 CALCRP30988 508 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 RBMXP38159 391 aaKnown RBP5.15□□□□□ -1.58
VPS50-205ENST00000441602 FABP6P51161 128 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 SEC61A1P61619 476 aaKnown RBP5.15□□□□□ -1.58
VPS50-205ENST00000441602 FGL1Q08830 312 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 PAN3Q58A45 887 aaKnown RBP5.15□□□□□ -1.58
VPS50-205ENST00000441602 CRIP3Q6Q6R5 217 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 FYTTD1Q96QD9 318 aaKnown RBP5.15□□□□□ -1.58
VPS50-205ENST00000441602 SYT3Q9BQG1 590 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 SULT4A1Q9BR01 284 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 PDCD10Q9BUL8 212 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 SHPKQ9UHJ6 478 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 ELF5Q9UKW6 265 aaPredicted RBP5.15□□□□□ -1.58
VPS50-205ENST00000441602 KCNIP3Q9Y2W7 256 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 MEMO1Q9Y316 297 aa5.15□□□□□ -1.58
VPS50-205ENST00000441602 TRIOO75962 3097 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 TNRC6AQ8NDV7 1962 aaKnown RBP5.15□□□□□ -1.59
VPS50-205ENST00000441602 hCG_1807616A0A1W2PRN6 198 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 GOSR2O14653 212 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 SYNGR1O43759 233 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 HPXP02790 462 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 TK1P04183 234 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 GRPP07492 148 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 VSIG10L2P0DP72 767 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 KCNJ3P48549 501 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 ASCL1P50553 236 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 IL13RA1P78552 427 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 CYCSP99999 105 aaKnown RBP5.15□□□□□ -1.59
VPS50-205ENST00000441602 CD300CQ08708 224 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 KCNJ8Q15842 424 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 SMIM21Q3B7S5 101 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 SLC22A25Q6T423 547 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 SGPP2Q8IWX5 399 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 ZNF565Q8N9K5 539 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 POC1AQ8NBT0 407 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 OR13C8Q8NGS7 320 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 OR11L1Q8NGX0 322 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 OR10Z1Q8NGY1 313 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 MARCH1Q8TCQ1 289 aa5.15□□□□□ -1.59
VPS50-205ENST00000441602 FBXO9Q9UK97 447 aaPredicted RBP5.15□□□□□ -1.59
VPS50-205ENST00000441602 URB1O60287 2271 aaKnown RBP5.15□□□□□ -1.59
VPS50-205ENST00000441602 MED12LQ86YW9 2145 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 A0A0G2JNJ9 132 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 FABP7O15540 132 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 CTSDP07339 412 aaPredicted RBP5.14□□□□□ -1.59
VPS50-205ENST00000441602 ZNF728P0DKX0 622 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 AKR1C4P17516 323 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 MPV17P39210 176 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 NDUFA5Q16718 116 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 TMEM128Q5BJH2 165 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 UNQ6494/PRO21346Q6UXR6 183 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 Q6ZS49 121 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 WFDC8Q8IUA0 241 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 SCCPDHQ8NBX0 429 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 ST6GALNAC3Q8NDV1 305 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 TMEM185AQ8NFB2 350 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 OR2T35Q8NGX2 323 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 PIK3IP1Q96FE7 263 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 DIRC2Q96SL1 478 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 CHIAQ9BZP6 476 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 SLA2Q9H6Q3 261 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 IFT22Q9H7X7 185 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 FN3KRPQ9HA64 309 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 RAB9BQ9NP90 201 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms