RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 CBR4Q8N4T8 237 aa13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 DTX3Q8N9I9 347 aa13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 FGGYQ96C11 551 aa13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 MRPL48Q96GC5 212 aaKnown RBP13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 OPALINQ96PE5 141 aa13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 MYCBPQ99417 103 aaPredicted RBP13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 NPFFR1Q9GZQ6 430 aa13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 RBFOX1Q9NWB1 397 aaKnown RBP13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 IL36RNQ9UBH0 155 aa13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 HHLA2Q9UM44 414 aa13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 EXOGQ9Y2C4 368 aaKnown RBP13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 CMYA5Q8N3K9 4069 aa13.18□□□□□ -0.3
SNRPD3-204ENST00000439775 CHST1O43916 411 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 INMTO95050 263 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 TSPAN15O95858 294 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 IGHA1P01876 353 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 MT-ND2P03891 347 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 ARG1P05089 322 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 GABRB1P18505 474 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 BCL3P20749 454 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 PEX2P28328 305 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 EDDM3AQ14507 147 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 HERPUD1Q15011 391 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 GRK1Q15835 563 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 ZIK1Q3SY52 487 aaPredicted RBP13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 FAM58AQ8N1B3 248 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 OR2T6Q8NHC8 308 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 LGALS12Q96DT0 336 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 MALSU1Q96EH3 234 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 PELI1Q96FA3 418 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 C4orf36Q96KX1 117 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 GLS2Q9UI32 602 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 GMPPBQ9Y5P6 360 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 WNK1Q9H4A3 2382 aa13.17□□□□□ -0.3
SNRPD3-204ENST00000439775 MEGF11A6BM72 1044 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 OR4C45A6NMZ5 311 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 J3QLW9 94 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 MGST3O14880 152 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 MPZL2O60487 215 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 PSPNO60542 156 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 DBTP11182 482 aaKnown RBP13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 ZNF19P17023 458 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 PRKACAP17612 351 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 GABRR1P24046 479 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 ERP29P30040 261 aaKnown RBP13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 PDZK1IP1Q13113 114 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 GALEQ14376 348 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 Q6ZTK2 550 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 CCDC121Q6ZUS5 278 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 C10orf67Q8IYJ2 551 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 DYNAPQ8N1N2 210 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 SYS1Q8N2H4 156 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 OR52N4Q8NGI2 321 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 OR51A4Q8NGJ6 313 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 OR13C3Q8NGS6 347 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 CHST6Q9GZX3 395 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 RHOFQ9HBH0 211 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 HMG20AQ9NP66 347 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 TCF19Q9Y242 345 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 SESN1Q9Y6P5 492 aa13.16□□□□□ -0.3
SNRPD3-204ENST00000439775 NOTCH1P46531 2555 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 MEX3AA1L020 520 aaKnown RBP13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 RPSAP08865 295 aaKnown RBP13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 OCM2P0CE71 109 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 OCMP0CE72 109 aaPredicted RBP13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 OR3A1P47881 315 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 DYNLT3P51808 116 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 P2RX3P56373 397 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 ALKBH1Q13686 389 aaKnown RBP13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 LDLRAD2Q5SZI1 272 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 MINOS1Q5TGZ0 78 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 ZNF676Q8N7Q3 588 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 OR10AC1Q8NH08 325 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 RPS4Y2Q8TD47 263 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 CFHR4Q92496 578 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 C9orf16Q9BUW7 83 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 ALG8Q9BVK2 526 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 INPP5EQ9NRR6 644 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 PITPNC1Q9UKF7 332 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 SIGLEC9Q9Y336 463 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 MINOS1-NBL1R4GNA1 71 aa13.15□□□□□ -0.3
SNRPD3-204ENST00000439775 IGHV2-26A0A0B4J1V2 119 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 IGKV1-12A0A0C4DH73 117 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 KDM4BO94953 1096 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 ALX3O95076 343 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 FADS2O95864 444 aaKnown RBP13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 IGKV1D-12P01611 117 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 CSF1P09603 554 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 DUSP1P28562 367 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 MRPL28Q13084 256 aaKnown RBP13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 FAM189A2Q15884 450 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 SSX2Q16385 188 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 ZBTB49Q6ZSB9 765 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 SAXO1Q8IYX7 474 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 Q8N2B8 174 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 KLHDC1Q8N7A1 406 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 TPRX1Q8N7U7 411 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 OR4S1Q8NGB4 309 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 OR13C9Q8NGT0 318 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms