RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ZNF737O75373 536 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 CD2P06729 351 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 HKR1P10072 659 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 RAB3AP20336 220 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 COMPP49747 757 aaPredicted RBP19.68■□□□□ 0.74
CPNE1-217ENST00000439669 EDDM3BP56851 147 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 LAIR2Q6ISS4 152 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 AHSA2Q719I0 299 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 GDPD3Q7L5L3 318 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 PNKDQ8N490 385 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 BPIFB6Q8NFQ5 453 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 TBC1D15Q8TC07 691 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 RPS4Y2Q8TD47 263 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 TFAP2CQ92754 450 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 SMIM19Q96E16 107 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 UNKLQ9H9P5 680 aaKnown RBP19.68■□□□□ 0.74
CPNE1-217ENST00000439669 CNOT2Q9NZN8 540 aaKnown RBP19.68■□□□□ 0.74
CPNE1-217ENST00000439669 GLS2Q9UI32 602 aa19.68■□□□□ 0.74
CPNE1-217ENST00000439669 SIRT4Q9Y6E7 314 aaPredicted RBP19.68■□□□□ 0.74
CPNE1-217ENST00000439669 IGKV1-12A0A0C4DH73 117 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 ALX3O95076 343 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 IGKV1D-12P01611 117 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 CCL3L1P16619 93 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 GABRR1P24046 479 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 EDDM3AQ14507 147 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 ZNF273Q14593 569 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 AWAT1Q58HT5 328 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 C16orf87Q6PH81 154 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 OR8H2Q8N162 312 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 STX19Q8N4C7 294 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 FBLIM1Q8WUP2 373 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 SSMEM1Q8WWF3 244 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 SNX22Q96L94 193 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 HMG20AQ9NP66 347 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 TAS2R4Q9NYW5 299 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 PSORS1C1Q9UIG5 152 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 GSTK1Q9Y2Q3 226 aa19.67■□□□□ 0.74
CPNE1-217ENST00000439669 TMEM82A0PJX8 343 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 MAGEB3O15480 346 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 OGG1O15527 345 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 KDM4BO94953 1096 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 LALBAP00709 142 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 TMEM225BP0DP42 221 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 UBE2E1P51965 193 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 KISS1Q15726 138 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 SPIN3Q5JUX0 258 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 SAXO1Q8IYX7 474 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 C3orf56Q8N813 242 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 ZFP41Q8N8Y5 198 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 ZSCAN4Q8NAM6 433 aaPredicted RBP19.66■□□□□ 0.74
CPNE1-217ENST00000439669 ZNF281Q9Y2X9 895 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 SF3B6Q9Y3B4 125 aaKnown RBP19.66■□□□□ 0.74
CPNE1-217ENST00000439669 PCDHGB5Q9Y5G0 923 aa19.66■□□□□ 0.74
CPNE1-217ENST00000439669 hCG_1809904A0A1W2PP81 198 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 A0A1W2PPE2 198 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 A0A1W2PR64 198 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 A0A1W2PRV1 198 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 MEIOCA2RUB1 952 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 FBP1P09467 338 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 SAA4P35542 130 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 AQP4P55087 323 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 FOXL1Q12952 345 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 ZNF146Q15072 292 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 GRK1Q15835 563 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 SATL1Q86VE3 508 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 LDLRAD3Q86YD5 345 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 TMEM86BQ8N661 226 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 OR51A2Q8NGJ7 313 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 NRG4Q8WWG1 115 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 TMEM106AQ96A25 262 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 CPNE2Q96FN4 548 aaPredicted RBP19.65■□□□□ 0.74
CPNE1-217ENST00000439669 GPER1Q99527 375 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 CHST6Q9GZX3 395 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 EXOSC4Q9NPD3 245 aaKnown RBP19.65■□□□□ 0.74
CPNE1-217ENST00000439669 PLCXD1Q9NUJ7 323 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 POMT1Q9Y6A1 747 aa19.65■□□□□ 0.74
CPNE1-217ENST00000439669 MEX3AA1L020 520 aaKnown RBP19.64■□□□□ 0.73
CPNE1-217ENST00000439669 SIRPB1O00241 398 aa19.64■□□□□ 0.73
CPNE1-217ENST00000439669 MYL12BO14950 172 aa19.64■□□□□ 0.73
CPNE1-217ENST00000439669 PAHP00439 452 aa19.64■□□□□ 0.73
CPNE1-217ENST00000439669 CFPP27918 469 aa19.64■□□□□ 0.73
CPNE1-217ENST00000439669 ZP1P60852 638 aa19.64■□□□□ 0.73
CPNE1-217ENST00000439669 CRIP3Q6Q6R5 217 aa19.64■□□□□ 0.73
CPNE1-217ENST00000439669 C17orf107Q6ZR85 190 aa19.64■□□□□ 0.73
CPNE1-217ENST00000439669 OR13C5Q8NGS8 318 aa19.64■□□□□ 0.73
CPNE1-217ENST00000439669 CHIAQ9BZP6 476 aa19.64■□□□□ 0.73
CPNE1-217ENST00000439669 SEBOXQ9HB31 216 aaPredicted RBP19.64■□□□□ 0.73
CPNE1-217ENST00000439669 PNMA8CA0A1B0GUJ8 204 aa19.63■□□□□ 0.73
CPNE1-217ENST00000439669 SH2D1BO14796 132 aa19.63■□□□□ 0.73
CPNE1-217ENST00000439669 IGHV4-59P01825 116 aa19.63■□□□□ 0.73
CPNE1-217ENST00000439669 C21orf33P30042 268 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-217ENST00000439669 PPP3R1P63098 170 aa19.63■□□□□ 0.73
CPNE1-217ENST00000439669 ACSM1Q08AH1 577 aa19.63■□□□□ 0.73
CPNE1-217ENST00000439669 DMKNQ6E0U4 476 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-217ENST00000439669 ASPHD2Q6ICH7 369 aa19.63■□□□□ 0.73
CPNE1-217ENST00000439669 HCP5Q6MZN7 132 aa19.63■□□□□ 0.73
CPNE1-217ENST00000439669 ZNF529Q6P280 563 aa19.63■□□□□ 0.73
CPNE1-217ENST00000439669 ZNF485Q8NCK3 441 aa19.63■□□□□ 0.73
CPNE1-217ENST00000439669 OR52N4Q8NGI2 321 aa19.63■□□□□ 0.73
CPNE1-217ENST00000439669 PPP1R35Q8TAP8 253 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms