RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 ZNHIT1O43257 154 aa13.32□□□□□ -0.28
APP-208ENST00000439274 EIF3GO75821 320 aaKnown RBP eCLIP13.32□□□□□ -0.28
APP-208ENST00000439274 NRASP01111 189 aa13.32□□□□□ -0.28
APP-208ENST00000439274 DANCRP0C864 163 aa13.32□□□□□ -0.28
APP-208ENST00000439274 CBR1P16152 277 aa13.32□□□□□ -0.28
APP-208ENST00000439274 HTR5AP47898 357 aa13.32□□□□□ -0.28
APP-208ENST00000439274 CAMLGP49069 296 aa13.32□□□□□ -0.28
APP-208ENST00000439274 CTAG1AP78358 180 aa13.32□□□□□ -0.28
APP-208ENST00000439274 FBXW12Q6X9E4 464 aa13.32□□□□□ -0.28
APP-208ENST00000439274 MEX3BQ6ZN04 569 aaKnown RBP13.32□□□□□ -0.28
APP-208ENST00000439274 SAP25Q8TEE9 199 aa13.32□□□□□ -0.28
APP-208ENST00000439274 MSI2Q96DH6 328 aaKnown RBP13.32□□□□□ -0.28
APP-208ENST00000439274 GALNT14Q96FL9 552 aa13.32□□□□□ -0.28
APP-208ENST00000439274 EIF5A2Q9GZV4 153 aaKnown RBP13.32□□□□□ -0.28
APP-208ENST00000439274 SPACA1Q9HBV2 294 aa13.32□□□□□ -0.28
APP-208ENST00000439274 HS3ST3B1Q9Y662 390 aa13.32□□□□□ -0.28
APP-208ENST00000439274 KPTNQ9Y664 436 aa13.32□□□□□ -0.28
APP-208ENST00000439274 H7C1Q1 480 aa13.32□□□□□ -0.28
APP-208ENST00000439274 GPR137BO60478 399 aa13.32□□□□□ -0.28
APP-208ENST00000439274 OSR2Q8N2R0 312 aa13.32□□□□□ -0.28
APP-208ENST00000439274 HPSE2Q8WWQ2 592 aa13.32□□□□□ -0.28
APP-208ENST00000439274 RNF122Q9H9V4 155 aa13.32□□□□□ -0.28
APP-208ENST00000439274 RCL1Q9Y2P8 373 aaKnown RBP13.32□□□□□ -0.28
APP-208ENST00000439274 PRH1P02810 166 aa13.31□□□□□ -0.28
APP-208ENST00000439274 AADACP22760 399 aa13.31□□□□□ -0.28
APP-208ENST00000439274 P2RY1P47900 373 aa13.31□□□□□ -0.28
APP-208ENST00000439274 RAC1P63000 192 aa13.31□□□□□ -0.28
APP-208ENST00000439274 ZNF92Q03936 586 aa13.31□□□□□ -0.28
APP-208ENST00000439274 GPR137CQ8N3F9 429 aa13.31□□□□□ -0.28
APP-208ENST00000439274 TP53RKQ96S44 253 aa13.31□□□□□ -0.28
APP-208ENST00000439274 C19orf12Q9NSK7 152 aa13.31□□□□□ -0.28
APP-208ENST00000439274 TMEM38BQ9NVV0 291 aa13.31□□□□□ -0.28
APP-208ENST00000439274 KIAA1549Q9HCM3 1950 aa13.31□□□□□ -0.28
APP-208ENST00000439274 BORCS7-ASMTA0A0B4J1R7 106 aa13.31□□□□□ -0.28
APP-208ENST00000439274 C7orf77A4D0Y5 90 aa13.31□□□□□ -0.28
APP-208ENST00000439274 M0R036 132 aa13.31□□□□□ -0.28
APP-208ENST00000439274 KLF7O75840 302 aaPredicted RBP13.31□□□□□ -0.28
APP-208ENST00000439274 SEC11BP0C7V7 166 aa13.31□□□□□ -0.28
APP-208ENST00000439274 CCL4P13236 92 aa13.31□□□□□ -0.28
APP-208ENST00000439274 CXCL12P48061 93 aa13.31□□□□□ -0.28
APP-208ENST00000439274 RAB5BP61020 215 aa13.31□□□□□ -0.28
APP-208ENST00000439274 PSG4Q00888 419 aa13.31□□□□□ -0.28
APP-208ENST00000439274 LHFPL2Q6ZUX7 228 aa13.31□□□□□ -0.28
APP-208ENST00000439274 C15orf54Q8N8G6 183 aa13.31□□□□□ -0.28
APP-208ENST00000439274 CCDC54Q8NEL0 328 aa13.31□□□□□ -0.28
APP-208ENST00000439274 INTS12Q96CB8 462 aaKnown RBP13.31□□□□□ -0.28
APP-208ENST00000439274 GINS3Q9BRX5 216 aa13.31□□□□□ -0.28
APP-208ENST00000439274 RGCCQ9H4X1 137 aa13.31□□□□□ -0.28
APP-208ENST00000439274 WDR54Q9H977 334 aa13.31□□□□□ -0.28
APP-208ENST00000439274 P4HTMQ9NXG6 502 aa13.31□□□□□ -0.28
APP-208ENST00000439274 A6NLC8 198 aa13.3□□□□□ -0.28
APP-208ENST00000439274 ACAA1P09110 424 aaPredicted RBP13.3□□□□□ -0.28
APP-208ENST00000439274 ZNF44P15621 663 aa13.3□□□□□ -0.28
APP-208ENST00000439274 PTAFRP25105 342 aa13.3□□□□□ -0.28
APP-208ENST00000439274 DUSP1P28562 367 aa13.3□□□□□ -0.28
APP-208ENST00000439274 ASCL4Q6XD76 172 aa13.3□□□□□ -0.28
APP-208ENST00000439274 RPS19BP1Q86WX3 136 aaKnown RBP13.3□□□□□ -0.28
APP-208ENST00000439274 SLC35G3Q8N808 338 aa13.3□□□□□ -0.28
APP-208ENST00000439274 PIGCQ92535 297 aa13.3□□□□□ -0.28
APP-208ENST00000439274 SUCNR1Q9BXA5 334 aa13.3□□□□□ -0.28
APP-208ENST00000439274 ZNF700Q9H0M5 742 aa13.3□□□□□ -0.28
APP-208ENST00000439274 BCO1Q9HAY6 547 aa13.3□□□□□ -0.28
APP-208ENST00000439274 ZNF286AQ9HBT8 521 aa13.3□□□□□ -0.28
APP-208ENST00000439274 SH2D2AQ9NP31 389 aa13.3□□□□□ -0.28
APP-208ENST00000439274 LUZP4Q9P127 313 aa13.3□□□□□ -0.28
APP-208ENST00000439274 FBXO7Q9Y3I1 522 aa13.3□□□□□ -0.28
APP-208ENST00000439274 NSG1A0A0A6YYJ2 146 aa13.3□□□□□ -0.28
APP-208ENST00000439274 A0A1W2PPE3 182 aa13.3□□□□□ -0.28
APP-208ENST00000439274 A0A1W2PPH5 198 aa13.3□□□□□ -0.28
APP-208ENST00000439274 OR6C6A6NF89 314 aa13.3□□□□□ -0.28
APP-208ENST00000439274 CST2P09228 141 aa13.3□□□□□ -0.28
APP-208ENST00000439274 FGF5P12034 268 aa13.3□□□□□ -0.28
APP-208ENST00000439274 FOLR2P14207 255 aa13.3□□□□□ -0.28
APP-208ENST00000439274 HLA-BQ31612 363 aa13.3□□□□□ -0.28
APP-208ENST00000439274 IGSF11Q5DX21 431 aa13.3□□□□□ -0.28
APP-208ENST00000439274 PLCXD3Q63HM9 321 aa13.3□□□□□ -0.28
APP-208ENST00000439274 TMEM182Q6ZP80 229 aaPredicted RBP13.3□□□□□ -0.28
APP-208ENST00000439274 CALHM1Q8IU99 346 aa13.3□□□□□ -0.28
APP-208ENST00000439274 LRTM2Q8N967 370 aa13.3□□□□□ -0.28
APP-208ENST00000439274 SUMF1Q8NBK3 374 aa13.3□□□□□ -0.28
APP-208ENST00000439274 MOB3AQ96BX8 217 aa13.3□□□□□ -0.28
APP-208ENST00000439274 GPHA2Q96T91 129 aa13.3□□□□□ -0.28
APP-208ENST00000439274 FBXO9Q9UK97 447 aaPredicted RBP13.3□□□□□ -0.28
APP-208ENST00000439274 ZNF587BE7ETH6 402 aa13.29□□□□□ -0.28
APP-208ENST00000439274 ST8SIA3O43173 380 aa13.29□□□□□ -0.28
APP-208ENST00000439274 PDGFBP01127 241 aaPredicted RBP13.29□□□□□ -0.28
APP-208ENST00000439274 PPP1CCP36873 323 aaKnown RBP13.29□□□□□ -0.28
APP-208ENST00000439274 NPBWR2P48146 333 aa13.29□□□□□ -0.28
APP-208ENST00000439274 B3GALT5-AS1P59052 145 aa13.29□□□□□ -0.28
APP-208ENST00000439274 KRBOX4Q5JUW0 171 aa13.29□□□□□ -0.28
APP-208ENST00000439274 LYSMD4Q5XG99 296 aa13.29□□□□□ -0.28
APP-208ENST00000439274 TMEM42Q69YG0 159 aa13.29□□□□□ -0.28
APP-208ENST00000439274 RBMS3Q6XE24 437 aaKnown RBP13.29□□□□□ -0.28
APP-208ENST00000439274 LGI3Q8N145 548 aa13.29□□□□□ -0.28
APP-208ENST00000439274 IFI44Q8TCB0 444 aa13.29□□□□□ -0.28
APP-208ENST00000439274 EGLN1Q9GZT9 426 aa13.29□□□□□ -0.28
APP-208ENST00000439274 WNT5BQ9H1J7 359 aa13.29□□□□□ -0.28
APP-208ENST00000439274 ZNF442Q9H7R0 627 aa13.29□□□□□ -0.28
APP-208ENST00000439274 C1orf196B1AJZ1 125 aa13.29□□□□□ -0.28
APP-208ENST00000439274 LINC01387J3KSC0 135 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms