RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 OR3A2P47893 321 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 HTR5AP47898 357 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 ID4P47928 161 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 RAB35Q15286 201 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 PNLIPRP3Q17RR3 467 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 VAX1Q5SQQ9 334 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 BAP18Q8IXM2 172 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 FGFBP3Q8TAT2 258 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 PECRQ9BY49 303 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 CHMP1AQ9HD42 196 aaPredicted RBP12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 ANAPC10Q9UM13 185 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 PRRC2CQ9Y520 2896 aaKnown RBP12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 SYNGR4O95473 234 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 MUC1P15941 1255 aaPredicted RBP12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 AVPI1Q5T686 147 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 FAHD2BQ6P2I3 314 aaPredicted RBP12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 ARRDC1Q8N5I2 433 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 OR1F12Q8NHA8 337 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 FNDC9Q8TBE3 224 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 TMEM230Q96A57 120 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 FAHD2AQ96GK7 314 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 FOXB1Q99853 325 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 HDHD3Q9BSH5 251 aaPredicted RBP12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 EHFQ9NZC4 300 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 ZNF581Q9P0T4 197 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 CARHSP1Q9Y2V2 147 aaKnown RBP12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 TRAV20A0A0B4J274 112 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 C9JQL5 133 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 ADAP1O75689 374 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 CRHP06850 196 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 PSMB6P28072 239 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 FAM189A2Q15884 450 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 TMEM128Q5BJH2 165 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 DRAM2Q6UX65 266 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 OR13G1Q8NGZ3 307 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 ARL11Q969Q4 196 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 GHRLQ9UBU3 117 aa12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 MCTS1Q9ULC4 181 aaKnown RBP12.03□□□□□ -0.48
PTCHD3-201ENST00000438700 IGKV3D-15A0A087WSY6 115 aa12.02□□□□□ -0.48
PTCHD3-201ENST00000438700 FOXI3A8MTJ6 420 aaPredicted RBP12.02□□□□□ -0.48
PTCHD3-201ENST00000438700 ZNHIT1O43257 154 aa12.02□□□□□ -0.48
PTCHD3-201ENST00000438700 CPT2P23786 658 aa12.02□□□□□ -0.48
PTCHD3-201ENST00000438700 ALDH3B1P43353 468 aa12.02□□□□□ -0.48
PTCHD3-201ENST00000438700 PSG4Q00888 419 aa12.02□□□□□ -0.48
PTCHD3-201ENST00000438700 HABP2Q14520 560 aaPredicted RBP12.02□□□□□ -0.48
PTCHD3-201ENST00000438700 ACTBL2Q562R1 376 aa12.02□□□□□ -0.48
PTCHD3-201ENST00000438700 TMEM100Q9NV29 134 aa12.02□□□□□ -0.48
PTCHD3-201ENST00000438700 GPR132Q9UNW8 380 aa12.02□□□□□ -0.48
PTCHD3-201ENST00000438700 NOSIPQ9Y314 301 aaKnown RBP12.02□□□□□ -0.48
PTCHD3-201ENST00000438700 DOCK7Q96N67 2140 aa12.02□□□□□ -0.48
PTCHD3-201ENST00000438700 IGKV1-27A0A075B6S5 117 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 IGKV1D-8A0A087WSZ0 117 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 TRGV5A0A0B4J1U4 118 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 SNAPINO95295 136 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 CST2P09228 141 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 POLR2GP62487 172 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 FAM209BQ5JX69 171 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 IGFL2Q6UWQ7 119 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 CLEC18BQ6UXF7 455 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 SLC16A14Q7RTX9 510 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 DMBX1Q8NFW5 382 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 CPT1CQ8TCG5 803 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 TMEM45BQ96B21 275 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 PRRG4Q9BZD6 226 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 PLEKHJ1Q9NW61 149 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 OR5AC2Q9NZP5 309 aa12.02□□□□□ -0.49
PTCHD3-201ENST00000438700 A0A1W2PPE3 182 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 COLCA2A8K830 154 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 F8VVB4 439 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 F8VWA3 439 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 TPT1P13693 172 aaKnown RBP12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 HLA-GP17693 338 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 TAS2R31P59538 309 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 TAF9Q16594 264 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 C9orf135Q5VTT2 229 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 AADACL3Q5VUY0 350 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 TUSC5Q8IXB3 177 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 RNF141Q8WVD5 230 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 NRIP2Q9BQI9 281 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 ZDHHC11Q9H8X9 412 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 RHOFQ9HBH0 211 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 SPRR3Q9UBC9 169 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 DBX1A6NMT0 343 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 MRPL33O75394 65 aaKnown RBP12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 SERPINA5P05154 406 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 GLRA1P23415 457 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 CHRFAM7AQ494W8 412 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 RIPPLY2Q5TAB7 128 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 SKA3Q8IX90 412 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 SLC30A7Q8NEW0 376 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 RTBDNQ9BSG5 229 aaPredicted RBP12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 TM2D1Q9BX74 207 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 SEC11CQ9BY50 192 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 CALHM2Q9HA72 323 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 GPR35Q9HC97 309 aa12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 TNRC6AQ8NDV7 1962 aaKnown RBP12.01□□□□□ -0.49
PTCHD3-201ENST00000438700 TEX13DA0A0J9YY54 714 aaPredicted RBP12□□□□□ -0.49
PTCHD3-201ENST00000438700 OR6C6A6NF89 314 aa12□□□□□ -0.49
PTCHD3-201ENST00000438700 SERPINE3A8MV23 424 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms