RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 ZNF260Q3ZCT1 412 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 SPANXN2Q5MJ10 180 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 RAB12Q6IQ22 244 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 Q6P435 159 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 BAIAP2L2Q6UXY1 529 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 ACP7Q6ZNF0 438 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 LINC00596Q86U02 117 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 KRTAP1-3Q8IUG1 177 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 FAM58AQ8N1B3 248 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 BATF2Q8N1L9 274 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 DTX3Q8N9I9 347 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 OR4M2Q8NGB6 313 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 OR10R2Q8NGX6 335 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 S100A13Q99584 98 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 GAL3ST1Q99999 423 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 URM1Q9BTM9 101 aaKnown RBP8.15□□□□□ -1.1
CUBN-204ENST00000438254 SELENOIQ9C0D9 397 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 WDR12Q9GZL7 423 aaKnown RBP8.15□□□□□ -1.1
CUBN-204ENST00000438254 ATG5Q9H1Y0 275 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 WDR13Q9H1Z4 485 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 CLEC4MQ9H2X3 399 aaPredicted RBP8.15□□□□□ -1.1
CUBN-204ENST00000438254 UBTD1Q9HAC8 227 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 SAP30LQ9HAJ7 183 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 ELL3Q9HB65 397 aaPredicted RBP8.15□□□□□ -1.1
CUBN-204ENST00000438254 DYNLRB1Q9NP97 96 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 PCDHB16Q9NRJ7 776 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 DCAF16Q9NXF7 216 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 RASL12Q9NYN1 266 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 RABL2AQ9UBK7 228 aaPredicted RBP8.15□□□□□ -1.1
CUBN-204ENST00000438254 HSF4Q9ULV5 492 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 RABL2BQ9UNT1 228 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 ST3GAL6Q9Y274 331 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 PLEKHA6Q9Y2H5 1048 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 CACNG2Q9Y698 323 aa8.15□□□□□ -1.1
CUBN-204ENST00000438254 SPTAN1Q13813 2472 aaKnown RBP8.15□□□□□ -1.1
CUBN-204ENST00000438254 LRBAP50851 2863 aa8.15□□□□□ -1.11
CUBN-204ENST00000438254 METTL21EPA6NDL7 271 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 A6NLC8 198 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 GEMIN2O14893 280 aaKnown RBP8.14□□□□□ -1.11
CUBN-204ENST00000438254 RP2O75695 350 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 FSTL3O95633 263 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 LMO1P25800 156 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 CHATP28329 748 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 PITPNBP48739 271 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 VEGFCP49767 419 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 MRPS11P82912 194 aaKnown RBP8.14□□□□□ -1.11
CUBN-204ENST00000438254 ZNF846Q147U1 533 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 TAF9Q16594 264 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 MPV17LQ2QL34 196 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 SPIN3Q5JUX0 258 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 TMEM69Q5SWH9 247 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 TEX36Q5VZQ5 186 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 PYHIN1Q6K0P9 492 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 FAM131AQ6UXB0 335 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 C20orf204Q6ZNR8 217 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 FAM90A1Q86YD7 464 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 IZUMO1Q8IYV9 350 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 OR56B1Q8NGI3 324 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 LRRC29Q8WV35 223 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 ST8SIA4Q92187 359 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 EMG1Q92979 244 aaKnown RBP8.14□□□□□ -1.11
CUBN-204ENST00000438254 SEH1LQ96EE3 360 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 CACNG6Q9BXT2 260 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 EGLN1Q9GZT9 426 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 ZNF222Q9UK12 451 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 PPP1R3CQ9UQK1 317 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 LAMP3Q9UQV4 416 aa8.14□□□□□ -1.11
CUBN-204ENST00000438254 TMEM178BH3BS89 294 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 J3QRK9 145 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 TNFRSF13BO14836 293 aaPredicted RBP8.13□□□□□ -1.11
CUBN-204ENST00000438254 GSTZ1O43708 216 aaPredicted RBP8.13□□□□□ -1.11
CUBN-204ENST00000438254 NXPH2O95156 264 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 KNG1P01042 644 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 HIST1H1DP16402 221 aaKnown RBP8.13□□□□□ -1.11
CUBN-204ENST00000438254 PRKACAP17612 351 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 AMY2BP19961 511 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 TALDO1P37837 337 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 IFITM3Q01628 133 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 MADCAM1Q13477 382 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 BAK1Q16611 211 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 GDPD1Q8N9F7 314 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 NEU4Q8WWR8 484 aaPredicted RBP8.13□□□□□ -1.11
CUBN-204ENST00000438254 YIPF5Q969M3 257 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 TRIM63Q969Q1 353 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 ARHGAP5-AS1Q96IT6 56 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 PECRQ9BY49 303 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 RAB1BQ9H0U4 201 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 AUNIPQ9H7T9 357 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 DIABLOQ9NR28 239 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 DECR2Q9NUI1 292 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 TMEM106BQ9NUM4 274 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 RNF7Q9UBF6 113 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 ELF5Q9UKW6 265 aaPredicted RBP8.13□□□□□ -1.11
CUBN-204ENST00000438254 NPTNQ9Y639 398 aa8.13□□□□□ -1.11
CUBN-204ENST00000438254 DYSFO75923 2080 aa8.12□□□□□ -1.11
CUBN-204ENST00000438254 IGKV1D-17A0A075B6S4 117 aa8.12□□□□□ -1.11
CUBN-204ENST00000438254 TRAV18A0A075B6X5 111 aa8.12□□□□□ -1.11
CUBN-204ENST00000438254 TRAV24A0A0B4J272 114 aa8.12□□□□□ -1.11
CUBN-204ENST00000438254 IGHV1-69-2A0A0G2JMI3 117 aa8.12□□□□□ -1.11
CUBN-204ENST00000438254 hCG_1807616A0A1W2PRN6 198 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms