RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 RAET1LQ5VY80 246 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 FAM131AQ6UXB0 335 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 LRRN1Q6UXK5 716 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 LHFPL4Q7Z7J7 247 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 LRRC28Q86X40 367 aaPredicted RBP5.3□□□□□ -1.56
SPEN-202ENST00000438066 RAB43Q86YS6 212 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 FAM89BQ8N5H3 189 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 OR6X1Q8NH79 312 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 OR5AK2Q8NH90 309 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 THEM6Q8WUY1 208 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 SECTM1Q8WVN6 248 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 PINX1Q96BK5 328 aaKnown RBP5.3□□□□□ -1.56
SPEN-202ENST00000438066 SLC25A44Q96H78 314 aaPredicted RBP5.3□□□□□ -1.56
SPEN-202ENST00000438066 ST6GAL2Q96JF0 529 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 EMC6Q9BV81 110 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 B3GAT2Q9NPZ5 323 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 DEPPQ9NTK1 212 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 DKKL1Q9UK85 242 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 LRP12Q9Y561 859 aa5.3□□□□□ -1.56
SPEN-202ENST00000438066 PRRC2CQ9Y520 2896 aaKnown RBP5.3□□□□□ -1.56
SPEN-202ENST00000438066 A0A1B0GTH9 108 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 GPR171O14626 319 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 ARPC1BO15143 372 aaKnown RBP5.29□□□□□ -1.56
SPEN-202ENST00000438066 EIF1BO60739 113 aaKnown RBP5.29□□□□□ -1.56
SPEN-202ENST00000438066 PFDN1O60925 122 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 ZNF432O94892 652 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 TSHBP01222 138 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 EIF4EP06730 217 aaKnown RBP5.29□□□□□ -1.56
SPEN-202ENST00000438066 IGHV4-38-2P0DP08 117 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 SLC2A2P11168 524 aaPredicted RBP5.29□□□□□ -1.56
SPEN-202ENST00000438066 SFTPCP11686 197 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 SPNP16150 400 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 SRMP19623 302 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 NR4A2P43354 598 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 CYB561P49447 251 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 DEFA1P59665 94 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 DEFA3P59666 94 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 ASAH1Q13510 395 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 EIF2B1Q14232 305 aaKnown RBP5.29□□□□□ -1.56
SPEN-202ENST00000438066 P2RY14Q15391 338 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 TWIST1Q15672 202 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 STPG1Q5TH74 334 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 AGAP7PQ5VUJ5 663 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 DEGS2Q6QHC5 323 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 CATSPERDQ86XM0 798 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 OR10AC1Q8NH08 325 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 NEUROG1Q92886 237 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 PPP1R14BQ96C90 147 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 JSRP1Q96MG2 331 aaPredicted RBP5.29□□□□□ -1.56
SPEN-202ENST00000438066 IP6K3Q96PC2 410 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 ELOVL3Q9HB03 270 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 CYB5R1Q9UHQ9 305 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 ELF5Q9UKW6 265 aaPredicted RBP5.29□□□□□ -1.56
SPEN-202ENST00000438066 MRPS18CQ9Y3D5 142 aaKnown RBP5.29□□□□□ -1.56
SPEN-202ENST00000438066 ZNF175Q9Y473 711 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 RNF115Q9Y4L5 304 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 CELSR3Q9NYQ7 3312 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 ZNF407Q9C0G0 2248 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 DNAJC13O75165 2243 aa5.29□□□□□ -1.56
SPEN-202ENST00000438066 A0A0J9YW62 118 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 XKRY2A2RUG3 117 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 PINLYPA6NC86 204 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 RNF222A6NCQ9 220 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 TRABD2BA6NFA1 517 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 AIPO00170 330 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 VAMP5O95183 116 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 PAHP00439 452 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 APOA1P02647 267 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 ZNF823P16415 610 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 ZNF43P17038 809 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 NPR2P20594 1047 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 LAP3P28838 519 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 NBL1P41271 181 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 ZNF133P52736 654 aaPredicted RBP5.28□□□□□ -1.56
SPEN-202ENST00000438066 RIDAP52758 137 aaKnown RBP5.28□□□□□ -1.56
SPEN-202ENST00000438066 EXOSC2Q13868 293 aaKnown RBP5.28□□□□□ -1.56
SPEN-202ENST00000438066 TMEM225Q6GV28 225 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 SLC25A47Q6Q0C1 308 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 STAC2Q6ZMT1 411 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 GDPD3Q7L5L3 318 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 DCXRQ7Z4W1 244 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 LRRTM1Q86UE6 522 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 TMEM123Q8N131 208 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 ZNF676Q8N7Q3 588 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 SAMD12Q8N8I0 201 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 DEFB124Q8NES8 71 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 OR51A4Q8NGJ6 313 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 OR5H6Q8NGV6 325 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 TRMT10AQ8TBZ6 339 aaKnown RBP5.28□□□□□ -1.56
SPEN-202ENST00000438066 RNF133Q8WVZ7 376 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 C11orf40Q8WZ69 217 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 RBP7Q96R05 134 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 COMMD4Q9H0A8 199 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 TIGARQ9NQ88 270 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 ABRACLQ9P1F3 81 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 FBXL3Q9UKT7 428 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 LHFPL6Q9Y693 200 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 FAM186AA6NE01 2351 aa5.28□□□□□ -1.56
SPEN-202ENST00000438066 AKAP13Q12802 2813 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms