RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 BEND2Q8NDZ0 799 aa11.48□□□□□ -0.57
LINC01088-201ENST00000437737 PHYHIPQ92561 330 aa11.48□□□□□ -0.57
LINC01088-201ENST00000437737 CCL13Q99616 98 aa11.48□□□□□ -0.57
LINC01088-201ENST00000437737 SSX3Q99909 188 aa11.48□□□□□ -0.57
LINC01088-201ENST00000437737 FAM234AQ9H0X4 552 aa11.48□□□□□ -0.57
LINC01088-201ENST00000437737 RAB18Q9NP72 206 aa11.48□□□□□ -0.57
LINC01088-201ENST00000437737 FAM206AQ9NX38 181 aa11.48□□□□□ -0.57
LINC01088-201ENST00000437737 DUX4Q9UBX2 424 aa11.48□□□□□ -0.57
LINC01088-201ENST00000437737 RSL24D1Q9UHA3 163 aaKnown RBP11.48□□□□□ -0.57
LINC01088-201ENST00000437737 NUFIP1Q9UHK0 495 aaKnown RBP11.48□□□□□ -0.57
LINC01088-201ENST00000437737 ZNF391Q9UJN7 358 aa11.48□□□□□ -0.57
LINC01088-201ENST00000437737 STUB1Q9UNE7 303 aa11.48□□□□□ -0.57
LINC01088-201ENST00000437737 COL7A1Q02388 2944 aa11.48□□□□□ -0.57
LINC01088-201ENST00000437737 PNMA8CA0A1B0GUJ8 204 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 TRDV1A0A1B0GX56 115 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 AIREO43918 545 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 GMDSO60547 372 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 SRSF10O75494 262 aaKnown RBP11.47□□□□□ -0.57
LINC01088-201ENST00000437737 GATBO75879 557 aaKnown RBP11.47□□□□□ -0.57
LINC01088-201ENST00000437737 PTBP3O95758 552 aaKnown RBP11.47□□□□□ -0.57
LINC01088-201ENST00000437737 ISG15P05161 165 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 ANXA2P07355 339 aaKnown RBP11.47□□□□□ -0.57
LINC01088-201ENST00000437737 ACSM4P0C7M7 580 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 CD28P10747 220 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 IGLL1P15814 213 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 MAPK3P27361 379 aaPredicted RBP11.47□□□□□ -0.57
LINC01088-201ENST00000437737 PRKXP51817 358 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 ZNF121P58317 390 aaPredicted RBP11.47□□□□□ -0.57
LINC01088-201ENST00000437737 KRTAP27-1Q3LI81 207 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 WDR38Q5JTN6 314 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 TEX36Q5VZQ5 186 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 CD200R1LQ6Q8B3 271 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 NDUFA11Q86Y39 141 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 ELMOD2Q8IZ81 293 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 ZFP41Q8N8Y5 198 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 GPR148Q8TDV2 347 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 TMED9Q9BVK6 235 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 NPFFR1Q9GZQ6 430 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 PBOV1Q9GZY1 135 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 OR10A2Q9H208 303 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 ENPP5Q9UJA9 477 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 CEPT1Q9Y6K0 416 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 TENM3Q9P273 2699 aa11.47□□□□□ -0.57
LINC01088-201ENST00000437737 A0A0U1RQV5 110 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 GGT3PA6NGU5 568 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 OR4C45A6NMZ5 311 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 CD300LBA8K4G0 201 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 SLC22A1O15245 554 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 NDUFB3O43676 98 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 ZFPL1O95159 310 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 GABARAPO95166 117 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 CFL1P23528 166 aaKnown RBP11.46□□□□□ -0.57
LINC01088-201ENST00000437737 GADD45AP24522 165 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 FGF9P31371 208 aaPredicted RBP11.46□□□□□ -0.57
LINC01088-201ENST00000437737 UBE2E1P51965 193 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 NANOS3P60323 173 aaKnown RBP11.46□□□□□ -0.57
LINC01088-201ENST00000437737 CD69Q07108 199 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 IKZF1Q13422 519 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 MICBQ29980 383 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 RSPO1Q2MKA7 263 aaPredicted RBP11.46□□□□□ -0.57
LINC01088-201ENST00000437737 SLC36A1Q7Z2H8 476 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 NAA40Q86UY6 237 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 FAM216BQ8N7L0 139 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 Q8N7P7 452 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 DTX3Q8N9I9 347 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 H1FXQ92522 213 aaKnown RBP11.46□□□□□ -0.57
LINC01088-201ENST00000437737 PGAM5Q96HS1 289 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 PGLYRP3Q96LB9 341 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 DMRTB1Q96MA1 342 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 NKX3-1Q99801 234 aaPredicted RBP11.46□□□□□ -0.57
LINC01088-201ENST00000437737 RGCCQ9H4X1 137 aa11.46□□□□□ -0.57
LINC01088-201ENST00000437737 SF3B6Q9Y3B4 125 aaKnown RBP11.46□□□□□ -0.57
LINC01088-201ENST00000437737 SIRT4Q9Y6E7 314 aaPredicted RBP11.46□□□□□ -0.57
LINC01088-201ENST00000437737 DNAH9Q9NYC9 4486 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.45□□□□□ -0.58
LINC01088-201ENST00000437737 XRCC2O43543 280 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 MTRF1O75570 445 aaKnown RBP11.45□□□□□ -0.58
LINC01088-201ENST00000437737 ARL6IP5O75915 188 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 MZT1Q08AG7 82 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 LRRC75BQ2VPJ9 315 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 NCR3LG1Q68D85 454 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 FAM57BQ71RH2 274 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 PRSS35Q8N3Z0 413 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 LRRC29Q8WV35 223 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 TNFRSF14Q92956 283 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 TMEM203Q969S6 136 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 RNF166Q96A37 237 aaPredicted RBP11.45□□□□□ -0.58
LINC01088-201ENST00000437737 ISOC1Q96CN7 298 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 PDCD1LG2Q9BQ51 273 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 CHCHD6Q9BRQ6 235 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 DCTN5Q9BTE1 182 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 RBM38Q9H0Z9 239 aaKnown RBP11.45□□□□□ -0.58
LINC01088-201ENST00000437737 OPA3Q9H6K4 179 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 EXOSC4Q9NPD3 245 aaKnown RBP11.45□□□□□ -0.58
LINC01088-201ENST00000437737 BRD7Q9NPI1 651 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 C14orf119Q9NWQ9 140 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 HHLA2Q9UM44 414 aa11.45□□□□□ -0.58
LINC01088-201ENST00000437737 LOC100506127A0A0U1RQW1 187 aa11.44□□□□□ -0.58
LINC01088-201ENST00000437737 GABRPO00591 440 aa11.44□□□□□ -0.58
LINC01088-201ENST00000437737 PEX14O75381 377 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms