RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 ALKBH3Q96Q83 286 aaPredicted RBP9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 NRIP2Q9BQI9 281 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 RAB18Q9NP72 206 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 RNASEK-C17orf49H0YIS7 233 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 FGF16O43320 207 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 FBXO24O75426 580 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF133P52736 654 aaPredicted RBP9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 TAF9Q16594 264 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 Q7L0L9 218 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 BAP18Q8IXM2 172 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 THOC3Q96J01 351 aaKnown RBP9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF700Q9H0M5 742 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 SMOC1Q9H4F8 434 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 MMP24Q9Y5R2 645 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 FAM186AA6NE01 2351 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 CCDC187A0A096LP49 1063 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 F10P00742 488 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 RFPL3SP0C7P2 107 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 PJVKQ0ZLH3 352 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 CHRFAM7AQ494W8 412 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 AKR1C8PQ5T2L2 129 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 OR2A2Q6IF42 318 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF585AQ6P3V2 769 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 MAML2Q8IZL2 1156 aaPredicted RBP9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 SLC30A7Q8NEW0 376 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 FGFBP3Q8TAT2 258 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 NAT6Q93015 286 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 FAAP24Q9BTP7 215 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 TM2D1Q9BX74 207 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 KCNIP3Q9Y2W7 256 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 URGCP-MRPS24S4R325 110 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 KIAA1549Q9HCM3 1950 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 FREM1Q5H8C1 2179 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 A0A087WZY1 265 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 FAM230AA0A1W2PPH8 454 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 FAM157CP0CG43 387 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 TMEM225BP0DP42 221 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 OPRM1P35372 400 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 MTCP1P56278 107 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 SPEM2Q0P670 501 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 IL15RAQ13261 267 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 COTL1Q14019 142 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 IL11RAQ14626 422 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 CDCP2Q5VXM1 449 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 POC1AQ8NBT0 407 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 AGBL5Q8NDL9 886 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 OR4A4PQ8NGN8 299 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 PP6455Q8WZ26 134 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 NTNG2Q96CW9 530 aa9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 NECAB3Q96P71 396 aaPredicted RBP9.06□□□□□ -0.96
CLSTN1-203ENST00000435891 PRRC2CQ9Y520 2896 aaKnown RBP9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 SFTPBP07988 381 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 SNRPCP09234 159 aaKnown RBP9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 B4GALT1P15291 398 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 RCC1P18754 421 aaPredicted RBP9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 CRYGSP22914 178 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 S100A10P60903 97 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 PDCD1Q15116 288 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 PRSS54Q6PEW0 395 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 Q96M66 194 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 IP6K3Q96PC2 410 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF2Q9BSG1 426 aaPredicted RBP9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 EIF5A2Q9GZV4 153 aaKnown RBP9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 PLEKHJ1Q9NW61 149 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 CARHSP1Q9Y2V2 147 aaKnown RBP9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 FAM221AA4D161 298 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 FABP4P15090 132 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 FKBP2P26885 142 aaKnown RBP9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 GNG10P50151 68 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 B3GALT5-AS1P59052 145 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 RPUSD3Q6P087 351 aaKnown RBP9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 PLXDC2Q6UX71 529 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 BATF2Q8N1L9 274 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 SECTM1Q8WVN6 248 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 PRDM6Q9NQX0 595 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 NXT1Q9UKK6 140 aaKnown RBP9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 GPR179Q6PRD1 2367 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 NSG1A0A0A6YYJ2 146 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 A0A1W2PPE2 198 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 GLI4P10075 376 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 HTR5AP47898 357 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 SUCLG1P53597 346 aaKnown RBP9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 TAS2R46P59540 309 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 RAC1P63000 192 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 CYCSP99999 105 aaKnown RBP9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 Q0VFX4 171 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 MST1LQ2TV78 715 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 AWAT1Q58HT5 328 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 FAM27BQ5VT28 67 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 DMBX1Q8NFW5 382 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 OR2Y1Q8NGV0 311 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 TMEM100Q9NV29 134 aa9.05□□□□□ -0.96
CLSTN1-203ENST00000435891 C7orf77A4D0Y5 90 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 SERPINE3A8MV23 424 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 SYNGR3O43761 229 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 VAMP5O95183 116 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 CD79AP11912 226 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 MLF1P58340 268 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 EXT1Q16394 746 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms