RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 POC1AQ8NBT0 407 aa14.39□□□□□ -0.11
LIMK1-203ENST00000435201 OR5A2Q8NGI9 324 aa14.39□□□□□ -0.11
LIMK1-203ENST00000435201 DYRK2Q92630 601 aa14.39□□□□□ -0.11
LIMK1-203ENST00000435201 BCL2L2Q92843 193 aaPredicted RBP14.39□□□□□ -0.11
LIMK1-203ENST00000435201 PIK3IP1Q96FE7 263 aa14.39□□□□□ -0.11
LIMK1-203ENST00000435201 HIST1H2AAQ96QV6 131 aa14.39□□□□□ -0.11
LIMK1-203ENST00000435201 RNF126Q9BV68 326 aa14.39□□□□□ -0.11
LIMK1-203ENST00000435201 PARD6AQ9NPB6 346 aa14.39□□□□□ -0.11
LIMK1-203ENST00000435201 NGFP01138 241 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 ZNF250P15622 560 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 BCL3P20749 454 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 NPBWR2P48146 333 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 GPM6AP51674 278 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 FGF12P61328 243 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 HIKESHIQ53FT3 197 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 BRICD5Q6PL45 260 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 OR5L1Q8NGL2 311 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 GMPPAQ96IJ6 420 aaPredicted RBP14.38□□□□□ -0.11
LIMK1-203ENST00000435201 OR10C1Q96KK4 312 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 FGF23Q9GZV9 251 aaPredicted RBP14.38□□□□□ -0.11
LIMK1-203ENST00000435201 GLRX2Q9NS18 164 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 ANKRD30BLA7E2S9 258 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 CD300LBA8K4G0 201 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 ZNF732B4DXR9 585 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 ZP3P21754 424 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 GLP1RP43220 463 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 ABCA11PQ4W5N1 156 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 TMPRSS7Q7RTY8 843 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 P4HA3Q7Z4N8 544 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 HSD17B13Q7Z5P4 300 aaPredicted RBP14.38□□□□□ -0.11
LIMK1-203ENST00000435201 VASH2Q86V25 355 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 STOML3Q8TAV4 291 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 SLAMF9Q96A28 289 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 ZNF75AQ96N20 296 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 LIME1Q9H400 295 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 NUP50Q9UKX7 468 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 MPC1Q9Y5U8 109 aa14.38□□□□□ -0.11
LIMK1-203ENST00000435201 MPTX1A8MV57 137 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 H0YIZ8 118 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 LRP3O75074 770 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 HOXB5P09067 269 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 NUBP1P53384 320 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 PIGPP57054 158 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 IL15RAQ13261 267 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 DAZAP2Q15038 168 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-203ENST00000435201 SRSF7Q16629 238 aaKnown RBP eCLIP14.37□□□□□ -0.11
LIMK1-203ENST00000435201 MPV17LQ2QL34 196 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 Q6ZS49 121 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 TOMM40LQ969M1 308 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 MARS2Q96GW9 593 aaKnown RBP14.37□□□□□ -0.11
LIMK1-203ENST00000435201 ASCL3Q9NQ33 180 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 FAM86C1Q9NVL1 165 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 CRIM1Q9NZV1 1036 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 KCNIP3Q9Y2W7 256 aa14.37□□□□□ -0.11
LIMK1-203ENST00000435201 SPAARA0A1B0GVQ0 90 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 FAM221AA4D161 298 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 OR5B21A6NL26 309 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 F8VVB4 439 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 F8VWA3 439 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 TRAPPC2LH3BP13 241 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 J3QW42 95 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 NKX2-8O15522 239 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 IFNA21P01568 189 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 IGHG3P01860 377 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 FCGR2CP31995 323 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 WNT5AP41221 380 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 UCP3P55916 312 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 RBM39Q14498 530 aaKnown RBP14.36□□□□□ -0.11
LIMK1-203ENST00000435201 MDP1Q86V88 176 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 SLC38A6Q8IZM9 456 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 EIF4E3Q8N5X7 224 aaKnown RBP14.36□□□□□ -0.11
LIMK1-203ENST00000435201 RELL2Q8NC24 303 aaPredicted RBP14.36□□□□□ -0.11
LIMK1-203ENST00000435201 SLC30A7Q8NEW0 376 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 EXTL1Q92935 676 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 MOB3AQ96BX8 217 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 NAA60Q9H7X0 242 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 DNAJB11Q9UBS4 358 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 KCNMB2Q9Y691 235 aa14.36□□□□□ -0.11
LIMK1-203ENST00000435201 FGF2P09038 288 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 TPT1P13693 172 aaKnown RBP14.35□□□□□ -0.11
LIMK1-203ENST00000435201 NAAAQ02083 359 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 SNTB1Q13884 538 aaKnown RBP14.35□□□□□ -0.11
LIMK1-203ENST00000435201 PDCD1Q15116 288 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 PAN3Q58A45 887 aaKnown RBP14.35□□□□□ -0.11
LIMK1-203ENST00000435201 TFAP2EQ6VUC0 442 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 LINC00596Q86U02 117 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 OR5P3Q8WZ94 311 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 GALNT14Q96FL9 552 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 AQP10Q96PS8 301 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 DMRTA2Q96SC8 542 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 PLK3Q9H4B4 646 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 RCC2Q9P258 522 aaKnown RBP14.35□□□□□ -0.11
LIMK1-203ENST00000435201 A8MXK9 166 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 KRBOX1C9JBD0 128 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 ZNHIT1O43257 154 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 CCL11P51671 97 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 HERV-K104P61576 105 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 PMP22Q01453 160 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 RAB32Q13637 225 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 TBC1D28Q2M2D7 210 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms