RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 RDH12Q96NR8 316 aa17.98■□□□□ 0.47
HMG20B-205ENST00000435022 SMPD3Q9NY59 655 aaPredicted RBP17.98■□□□□ 0.47
HMG20B-205ENST00000435022 AASSQ9UDR5 926 aa17.98■□□□□ 0.47
HMG20B-205ENST00000435022 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.98■□□□□ 0.47
HMG20B-205ENST00000435022 TBL2Q9Y4P3 447 aaKnown RBP17.98■□□□□ 0.47
HMG20B-205ENST00000435022 LOC100130705A0A1B0GUX0 176 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 hCG_1809904A0A1W2PP81 198 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 A0A1W2PPE2 198 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 A0A1W2PR64 198 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 A0A1W2PRV1 198 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 PSPNO60542 156 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 PRB2P02812 416 aaPredicted RBP17.97■□□□□ 0.47
HMG20B-205ENST00000435022 CHRM2P08172 466 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 CD28P10747 220 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 ATP6V1E1P36543 226 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 NPBWR2P48146 333 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 FAM189A2Q15884 450 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 SSX2Q16385 188 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 SLC25A30Q5SVS4 291 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 MEDAGQ5VYS4 303 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 ENTHD1Q8IYW4 607 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 OR10H4Q8NGA5 316 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 ADAT3Q96EY9 351 aaPredicted RBP17.97■□□□□ 0.47
HMG20B-205ENST00000435022 PLEKHA1Q9HB21 404 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 RBFOX1Q9NWB1 397 aaKnown RBP17.97■□□□□ 0.47
HMG20B-205ENST00000435022 FAM118AQ9NWS6 357 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 SLC7A11Q9UPY5 501 aa17.97■□□□□ 0.47
HMG20B-205ENST00000435022 MMP23AO75900 390 aa17.96■□□□□ 0.47
HMG20B-205ENST00000435022 GABRB1P18505 474 aa17.96■□□□□ 0.47
HMG20B-205ENST00000435022 FUT6P51993 359 aa17.96■□□□□ 0.47
HMG20B-205ENST00000435022 ZNF91Q05481 1191 aa17.96■□□□□ 0.47
HMG20B-205ENST00000435022 EDDM3AQ14507 147 aa17.96■□□□□ 0.47
HMG20B-205ENST00000435022 TP53I3Q53FA7 332 aa17.96■□□□□ 0.47
HMG20B-205ENST00000435022 GDPD3Q7L5L3 318 aa17.96■□□□□ 0.47
HMG20B-205ENST00000435022 RNF144BQ7Z419 303 aa17.96■□□□□ 0.47
HMG20B-205ENST00000435022 RNFT2Q96EX2 444 aa17.96■□□□□ 0.47
HMG20B-205ENST00000435022 CDCA4Q9BXL8 241 aa17.96■□□□□ 0.47
HMG20B-205ENST00000435022 CHST6Q9GZX3 395 aa17.96■□□□□ 0.47
HMG20B-205ENST00000435022 SLC16A6O15403 523 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 SULT1C4O75897 302 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 HAND1O96004 215 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 CALCBP10092 127 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 DUSP1P28562 367 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 BAIAP2L2Q6UXY1 529 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 EGFL6Q8IUX8 553 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 OR4S1Q8NGB4 309 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 OR13D1Q8NGV5 346 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 FOXRED1Q96CU9 486 aaPredicted RBP17.95■□□□□ 0.46
HMG20B-205ENST00000435022 MALSU1Q96EH3 234 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 SNX22Q96L94 193 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 ZNF714Q96N38 554 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 WNT10AQ9GZT5 417 aa17.95■□□□□ 0.46
HMG20B-205ENST00000435022 MPZL2O60487 215 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 BCL3P20749 454 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 ACTA2P62736 377 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 ACTG2P63267 376 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 ACTC1P68032 377 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 ACTA1P68133 377 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 CNN3Q15417 329 aaKnown RBP17.94■□□□□ 0.46
HMG20B-205ENST00000435022 TMEM95Q3KNT9 176 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 FBLN7Q53RD9 439 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 PACRGLQ8N7B6 248 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 ZNF555Q8NEP9 628 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 RPS4Y2Q8TD47 263 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 EMG1Q92979 244 aaKnown RBP17.94■□□□□ 0.46
HMG20B-205ENST00000435022 BORCS8Q96FH0 119 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 SEBOXQ9HB31 216 aaPredicted RBP17.94■□□□□ 0.46
HMG20B-205ENST00000435022 C8orf4Q9NR00 106 aa17.94■□□□□ 0.46
HMG20B-205ENST00000435022 IGHV2-26A0A0B4J1V2 119 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 IGKV1-12A0A0C4DH73 117 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 SNTNA6NMZ2 147 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 GATBO75879 557 aaKnown RBP17.93■□□□□ 0.46
HMG20B-205ENST00000435022 IGKV1D-12P01611 117 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 OR3A1P47881 315 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 DYNLT3P51808 116 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 NANOS3P60323 173 aaKnown RBP17.93■□□□□ 0.46
HMG20B-205ENST00000435022 BLCAPP62952 87 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 MEF2CQ06413 473 aaPredicted RBP17.93■□□□□ 0.46
HMG20B-205ENST00000435022 NSUN5P1Q3KNT7 163 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 OR10AC1Q8NH08 325 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 RHOXF1Q8NHV9 184 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 MMP28Q9H239 520 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 GNG8Q9UK08 70 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 HILPDAQ9Y5L2 63 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 LINC00312Q9Y6C7 94 aa17.93■□□□□ 0.46
HMG20B-205ENST00000435022 DNAH3Q8TD57 4116 aa17.92■□□□□ 0.46
HMG20B-205ENST00000435022 TRBV2A0A0J9YWF9 115 aa17.92■□□□□ 0.46
HMG20B-205ENST00000435022 J3QRE1 110 aa17.92■□□□□ 0.46
HMG20B-205ENST00000435022 FBXO24O75426 580 aa17.92■□□□□ 0.46
HMG20B-205ENST00000435022 DBTP11182 482 aaKnown RBP17.92■□□□□ 0.46
HMG20B-205ENST00000435022 DYNC1I2Q13409 638 aaKnown RBP17.92■□□□□ 0.46
HMG20B-205ENST00000435022 GRK1Q15835 563 aa17.92■□□□□ 0.46
HMG20B-205ENST00000435022 Q6ZPA2 131 aa17.92■□□□□ 0.46
HMG20B-205ENST00000435022 OR2G2Q8NGZ5 317 aa17.92■□□□□ 0.46
HMG20B-205ENST00000435022 C10orf35Q96D05 121 aa17.92■□□□□ 0.46
HMG20B-205ENST00000435022 OR5M11Q96RB7 305 aa17.92■□□□□ 0.46
HMG20B-205ENST00000435022 CITED2Q99967 270 aaPredicted RBP17.92■□□□□ 0.46
HMG20B-205ENST00000435022 FRRS1LQ9P0K9 344 aa17.92■□□□□ 0.46
HMG20B-205ENST00000435022 SESN1Q9Y6P5 492 aa17.92■□□□□ 0.46
HMG20B-205ENST00000435022 FAM90A22PA8MWA6 464 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms