RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 Q8NFD4 153 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 ADAMTS17Q8TE56 1095 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 TOMM40LQ969M1 308 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 TTTY12Q9BZ98 90 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 DEDDO75618 318 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 SYNGR4O95473 234 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 FAM157CP0CG43 387 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 HKR1P10072 659 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 COX5BP10606 129 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 DAZAP2Q15038 168 aaPredicted RBP16.04■□□□□ 0.16
CLK1-205ENST00000434813 DCAF10Q5QP82 559 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 ATRAIDQ6UW56 229 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 ARL11Q969Q4 196 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 MRPL24Q96A35 216 aaKnown RBP16.04■□□□□ 0.16
CLK1-205ENST00000434813 LRRC46Q96FV0 321 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 NARS2Q96I59 477 aaKnown RBP16.04■□□□□ 0.16
CLK1-205ENST00000434813 KCNIP3Q9Y2W7 256 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 FREM2Q5SZK8 3169 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 PROB1E7EW31 1015 aa16.03■□□□□ 0.16
CLK1-205ENST00000434813 MAGEA5P43359 124 aa16.03■□□□□ 0.16
CLK1-205ENST00000434813 ABCA11PQ4W5N1 156 aa16.03■□□□□ 0.16
CLK1-205ENST00000434813 SMUG1Q53HV7 270 aa16.03■□□□□ 0.16
CLK1-205ENST00000434813 TMEM211Q6ICI0 200 aa16.03■□□□□ 0.16
CLK1-205ENST00000434813 TUSC5Q8IXB3 177 aa16.03■□□□□ 0.16
CLK1-205ENST00000434813 LRTM2Q8N967 370 aa16.03■□□□□ 0.16
CLK1-205ENST00000434813 OR56B2PQ8NGI1 322 aa16.03■□□□□ 0.16
CLK1-205ENST00000434813 RTN4IP1Q8WWV3 396 aaPredicted RBP16.03■□□□□ 0.16
CLK1-205ENST00000434813 REPIN1Q9BWE0 567 aaKnown RBP16.03■□□□□ 0.16
CLK1-205ENST00000434813 RNF122Q9H9V4 155 aa16.03■□□□□ 0.16
CLK1-205ENST00000434813 PQLC2LA1A4F0 135 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM221AA4D161 298 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A10PA6NDY2 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A18PA6NE21 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A16PA6NEW6 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A20PA6NIJ5 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A8PA6NJQ4 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A7PA6NKC0 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM166BA8MTA8 275 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A22PA8MWA6 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A12PA8MX19 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A5PA8MXJ8 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A23PA8MXZ1 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A15PP0C7V4 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A13PP0C7W8 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A14PP0C7W9 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FAM90A24PP0C7X0 464 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FUT3P21217 361 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 FCGR2CP31995 323 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 UCP3P55916 312 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 TMEM187Q14656 261 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 SMCO1Q147U7 214 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 BRICD5Q6PL45 260 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 SLC25A26Q70HW3 274 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 TMEM200AQ86VY9 491 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 DEFB124Q8NES8 71 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 MOB3AQ96BX8 217 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 SUCNR1Q9BXA5 334 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 LPAR3Q9UBY5 353 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 STARD10Q9Y365 291 aa16.02■□□□□ 0.16
CLK1-205ENST00000434813 ZNF724A8MTY0 619 aa16.02■□□□□ 0.15
CLK1-205ENST00000434813 SIGLEC5O15389 551 aa16.02■□□□□ 0.15
CLK1-205ENST00000434813 OR5AC1P0C628 307 aa16.02■□□□□ 0.15
CLK1-205ENST00000434813 ITGA3P26006 1051 aa16.02■□□□□ 0.15
CLK1-205ENST00000434813 GLP1RP43220 463 aa16.02■□□□□ 0.15
CLK1-205ENST00000434813 Q6ZPA2 131 aa16.02■□□□□ 0.15
CLK1-205ENST00000434813 TMEM251Q8N6I4 163 aa16.02■□□□□ 0.15
CLK1-205ENST00000434813 BOLLQ8N9W6 283 aaKnown RBP16.02■□□□□ 0.15
CLK1-205ENST00000434813 PAPOLGQ9BWT3 736 aaKnown RBP16.02■□□□□ 0.15
CLK1-205ENST00000434813 CALHM2Q9HA72 323 aa16.02■□□□□ 0.15
CLK1-205ENST00000434813 OR2S2Q9NQN1 319 aa16.02■□□□□ 0.15
CLK1-205ENST00000434813 MMP26Q9NRE1 261 aa16.02■□□□□ 0.15
CLK1-205ENST00000434813 SLC2A9Q9NRM0 540 aa16.02■□□□□ 0.15
CLK1-205ENST00000434813 A0A096LPE4 126 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 A0A1W2PPZ6 126 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 TMEM218A2RU14 115 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 K7EPK0 472 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 ACTL6AO96019 429 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 ATF4P18848 351 aaPredicted RBP16.01■□□□□ 0.15
CLK1-205ENST00000434813 FXYD4P59646 89 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 DEFA5Q01523 94 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 C9orf135Q5VTT2 229 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 EIF5AL1Q6IS14 154 aaKnown RBP16.01■□□□□ 0.15
CLK1-205ENST00000434813 FOXRED2Q8IWF2 684 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 FAM71E2Q8N5Q1 922 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 ZNF442Q9H7R0 627 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 ZFHX2Q9C0A1 2572 aaPredicted RBP16.01■□□□□ 0.15
CLK1-205ENST00000434813 SS18L1O75177 396 aaPredicted RBP16.01■□□□□ 0.15
CLK1-205ENST00000434813 OR7C1O76099 320 aaPredicted RBP16.01■□□□□ 0.15
CLK1-205ENST00000434813 ZNF205O95201 554 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 HLA-HP01893 362 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 RPL12P30050 165 aaKnown RBP16.01■□□□□ 0.15
CLK1-205ENST00000434813 NPBWR2P48146 333 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 PRDX4Q13162 271 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 RPL7L1Q6DKI1 246 aaKnown RBP16.01■□□□□ 0.15
CLK1-205ENST00000434813 SAXO1Q8IYX7 474 aa16.01■□□□□ 0.15
CLK1-205ENST00000434813 APOBEC3DQ96AK3 386 aaPredicted RBP16.01■□□□□ 0.15
CLK1-205ENST00000434813 SAT2Q96F10 170 aaPredicted RBP16.01■□□□□ 0.15
CLK1-205ENST00000434813 C5orf49A4QMS7 147 aa16■□□□□ 0.15
CLK1-205ENST00000434813 ATG12O94817 140 aa16■□□□□ 0.15
CLK1-205ENST00000434813 GAPDHP04406 335 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms