RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 FAM90A5PA8MXJ8 464 aa16.72■□□□□ 0.27
VRK2-205ENST00000432057 FAM90A23PA8MXZ1 464 aa16.72■□□□□ 0.27
VRK2-205ENST00000432057 FAM90A15PP0C7V4 464 aa16.72■□□□□ 0.27
VRK2-205ENST00000432057 FAM90A13PP0C7W8 464 aa16.72■□□□□ 0.27
VRK2-205ENST00000432057 FAM90A14PP0C7W9 464 aa16.72■□□□□ 0.27
VRK2-205ENST00000432057 FAM90A24PP0C7X0 464 aa16.72■□□□□ 0.27
VRK2-205ENST00000432057 UCP2P55851 309 aa16.72■□□□□ 0.27
VRK2-205ENST00000432057 ALKBH6Q3KRA9 238 aa16.72■□□□□ 0.27
VRK2-205ENST00000432057 C3P1Q6ZMU1 363 aa16.72■□□□□ 0.27
VRK2-205ENST00000432057 Q6ZPA2 131 aa16.72■□□□□ 0.27
VRK2-205ENST00000432057 BHLHA15Q7RTS1 189 aaPredicted RBP16.72■□□□□ 0.27
VRK2-205ENST00000432057 PHB2Q99623 299 aa16.72■□□□□ 0.27
VRK2-205ENST00000432057 RTBDNQ9BSG5 229 aaPredicted RBP16.72■□□□□ 0.27
VRK2-205ENST00000432057 CEP295Q9C0D2 2601 aa16.72■□□□□ 0.27
VRK2-205ENST00000432057 HEATR1Q9H583 2144 aaKnown RBP16.72■□□□□ 0.27
VRK2-205ENST00000432057 GRK1Q15835 563 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 NDUFA5Q16718 116 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 NHLRC3Q5JS37 347 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 FAM180AQ6UWF9 173 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 ZNF573Q86YE8 665 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 TMEM185AQ8NFB2 350 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 ELMOD3Q96FG2 381 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 MARS2Q96GW9 593 aaKnown RBP16.71■□□□□ 0.27
VRK2-205ENST00000432057 POM121Q96HA1 1249 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 ZNF2Q9BSG1 426 aaPredicted RBP16.71■□□□□ 0.27
VRK2-205ENST00000432057 TMPRSS13Q9BYE2 586 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 ACACAQ13085 2346 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 C3orf80F5H4A9 247 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 RGS11O94810 467 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 SLC34A2O95436 690 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 CECR9P0C854 216 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 PPP3CBP16298 524 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 PRKACAP17612 351 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 CXCL2P19875 107 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 MPV17P39210 176 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 TMEM128Q5BJH2 165 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 SLC22A25Q6T423 547 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 C17orf78Q8N4C9 275 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 EXTL1Q92935 676 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 SCGB3A2Q96PL1 93 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 HEXA-AS1Q9H8Q6 139 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 C12orf4Q9NQ89 552 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 ITGB1BP2Q9UKP3 347 aa16.71■□□□□ 0.27
VRK2-205ENST00000432057 DMXL2Q8TDJ6 3036 aa16.7■□□□□ 0.26
VRK2-205ENST00000432057 DUS4LO95620 317 aaKnown RBP16.7■□□□□ 0.26
VRK2-205ENST00000432057 RAC2P15153 192 aa16.7■□□□□ 0.26
VRK2-205ENST00000432057 PGAM2P15259 253 aa16.7■□□□□ 0.26
VRK2-205ENST00000432057 CALCRP30988 508 aa16.7■□□□□ 0.26
VRK2-205ENST00000432057 P2RY6Q15077 328 aa16.7■□□□□ 0.26
VRK2-205ENST00000432057 KCTD9Q7L273 389 aa16.7■□□□□ 0.26
VRK2-205ENST00000432057 WDR86Q86TI4 376 aa16.7■□□□□ 0.26
VRK2-205ENST00000432057 ASB13Q8WXK3 278 aa16.7■□□□□ 0.26
VRK2-205ENST00000432057 ADAT1Q9BUB4 502 aaKnown RBP16.7■□□□□ 0.26
VRK2-205ENST00000432057 RTL8AQ9BWD3 113 aa16.7■□□□□ 0.26
VRK2-205ENST00000432057 OR51I2Q9H344 312 aa16.7■□□□□ 0.26
VRK2-205ENST00000432057 NOS1APO75052 506 aaPredicted RBP16.69■□□□□ 0.26
VRK2-205ENST00000432057 RHBDL1O75783 438 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 CRHP06850 196 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 OR5H8P0DN80 308 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 GLRA1P23415 457 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 DUSP1P28562 367 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 PMELP40967 661 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 SORDQ00796 357 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 IL24Q13007 206 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 PSG7Q13046 419 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 IKZF1Q13422 519 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 ZNF660Q6AZW8 331 aaPredicted RBP16.69■□□□□ 0.26
VRK2-205ENST00000432057 LPCAT3Q6P1A2 487 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 BEND4Q6ZU67 534 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 OR8H1Q8NGG4 311 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 MICU1Q9BPX6 476 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 PKIBQ9C010 78 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 LIME1Q9H400 295 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 ZNF286AQ9HBT8 521 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 NECAP2Q9NVZ3 263 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 ATMQ13315 3056 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 FXYD6-FXYD2A0A087WZ82 144 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 IQCF6A8MYZ5 107 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 J3QT63 122 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 ZNF205O95201 554 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 PTGER4P35408 488 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 SUPT4H1P63272 117 aaKnown RBP16.69■□□□□ 0.26
VRK2-205ENST00000432057 SLC9A3R2Q15599 337 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 MPV17LQ2QL34 196 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 TMEM211Q6ICI0 200 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 ZNF767PQ75MW2 155 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 KLF14Q8TD94 323 aaPredicted RBP16.69■□□□□ 0.26
VRK2-205ENST00000432057 FXYD6Q9H0Q3 95 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 PRR13Q9NZ81 148 aa16.69■□□□□ 0.26
VRK2-205ENST00000432057 RCC2Q9P258 522 aaKnown RBP16.69■□□□□ 0.26
VRK2-205ENST00000432057 TRAV14DV4A0A0A6YYC5 116 aa16.68■□□□□ 0.26
VRK2-205ENST00000432057 IGHV1-18A0A0C4DH31 117 aa16.68■□□□□ 0.26
VRK2-205ENST00000432057 OR5H1A6NKK0 313 aa16.68■□□□□ 0.26
VRK2-205ENST00000432057 ARPC5O15511 151 aa16.68■□□□□ 0.26
VRK2-205ENST00000432057 SFT2D2O95562 160 aa16.68■□□□□ 0.26
VRK2-205ENST00000432057 IGLV1-44P01699 117 aa16.68■□□□□ 0.26
VRK2-205ENST00000432057 SEC61A1P61619 476 aaKnown RBP16.68■□□□□ 0.26
VRK2-205ENST00000432057 SURF2Q15527 256 aaPredicted RBP16.68■□□□□ 0.26
VRK2-205ENST00000432057 TBR1Q16650 682 aa16.68■□□□□ 0.26
VRK2-205ENST00000432057 KRTCAP3Q53RY4 240 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms