RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 C19orf18Q8NEA5 215 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 OR10Z1Q8NGY1 313 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 OR52I2Q8NH67 350 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 SETD6Q8TBK2 473 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 SETD2Q9BYW2 2564 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-206ENST00000431390 MFNGO00587 321 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 GEMIN2O14893 280 aaKnown RBP15.41■□□□□ 0.06
HMGN1-206ENST00000431390 PTHLHP12272 177 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 PRKACAP17612 351 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 GABRR1P24046 479 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 CFHR2P36980 270 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 DEFA1P59665 94 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 DEFA3P59666 94 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 TNFAIP6P98066 277 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-206ENST00000431390 IL13RA2Q14627 380 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 MPV17LQ2QL34 196 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 MST1LQ2TV78 715 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 PLAC9Q5JTB6 97 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 FAM209AQ5JX71 171 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 ITLN1Q8WWA0 313 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 GCDHQ92947 438 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-206ENST00000431390 EMG1Q92979 244 aaKnown RBP15.41■□□□□ 0.06
HMGN1-206ENST00000431390 ERGIC1Q969X5 290 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 ZNF488Q96MN9 340 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 MS4A5Q9H3V2 200 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 FN3KRPQ9HA64 309 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 HES4Q9HCC6 221 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 HSF4Q9ULV5 492 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 RBMX2Q9Y388 322 aaKnown RBP15.41■□□□□ 0.06
HMGN1-206ENST00000431390 IGHV3-64DA0A0J9YX35 117 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 TMEM235A6NFC5 223 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 H3BUI4 141 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 TPD52L2O43399 206 aaKnown RBP15.4■□□□□ 0.06
HMGN1-206ENST00000431390 LANCL1O43813 399 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 CD3GP09693 182 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 GNB3P16520 340 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 INPP1P49441 399 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 PNLIPRP3Q17RR3 467 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 SWI5Q1ZZU3 235 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 SIGIRRQ6IA17 410 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 SPNS3Q6ZMD2 512 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 MEX3BQ6ZN04 569 aaKnown RBP15.4■□□□□ 0.06
HMGN1-206ENST00000431390 BATF2Q8N1L9 274 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 MUC15Q8N387 334 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 GPX8Q8TED1 209 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 FBXW5Q969U6 566 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 C14orf79Q96F83 325 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 ARHGAP5-AS1Q96IT6 56 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 PECRQ9BY49 303 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 ZMAT3Q9HA38 289 aaKnown RBP15.4■□□□□ 0.06
HMGN1-206ENST00000431390 UFSP2Q9NUQ7 469 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 C1orf123Q9NWV4 160 aa15.4■□□□□ 0.06
HMGN1-206ENST00000431390 FBXO9Q9UK97 447 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-206ENST00000431390 MEIOCA2RUB1 952 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 SERPINE3A8MV23 424 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 H7C417 338 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 CA11O75493 328 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 LPLP06858 475 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 CHATP28329 748 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 TLE4Q04727 773 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 SSBP1Q04837 148 aaKnown RBP15.39■□□□□ 0.05
HMGN1-206ENST00000431390 RGS21Q2M5E4 152 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 RNASE12Q5GAN4 147 aaKnown RBP15.39■□□□□ 0.05
HMGN1-206ENST00000431390 ZNF826PQ6ZT77 177 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 SEH1LQ96EE3 360 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 NEDD4LQ96PU5 975 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 DYNLRB1Q9NP97 96 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 MTFP1Q9UDX5 166 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 KCNK7Q9Y2U2 307 aa15.39■□□□□ 0.05
HMGN1-206ENST00000431390 hCG_1807616A0A1W2PRN6 198 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 ORC5O43913 435 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 RBBP9O75884 186 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 NXPH2O95156 264 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 TNFRSF1AP19438 455 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 GDNFP39905 211 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 ASAH1Q13510 395 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 PCGF3Q3KNV8 242 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 FIP1L1Q6UN15 594 aaKnown RBP15.38■□□□□ 0.05
HMGN1-206ENST00000431390 ST8SIA4Q92187 359 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 IFT22Q9H7X7 185 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 PLEKHJ1Q9NW61 149 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 RASL12Q9NYN1 266 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 TBC1D24Q9ULP9 559 aa15.38■□□□□ 0.05
HMGN1-206ENST00000431390 A6NNC1 897 aa15.37■□□□□ 0.05
HMGN1-206ENST00000431390 PDCD6O75340 191 aa15.37■□□□□ 0.05
HMGN1-206ENST00000431390 OR7C1O76099 320 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-206ENST00000431390 ECDO95905 644 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-206ENST00000431390 GSTT2BP0CG30 244 aa15.37■□□□□ 0.05
HMGN1-206ENST00000431390 PMELP40967 661 aa15.37■□□□□ 0.05
HMGN1-206ENST00000431390 GNG2P59768 71 aa15.37■□□□□ 0.05
HMGN1-206ENST00000431390 SNRPD2P62316 118 aaKnown RBP15.37■□□□□ 0.05
HMGN1-206ENST00000431390 GUCA2AQ02747 115 aa15.37■□□□□ 0.05
HMGN1-206ENST00000431390 SPRNQ5BIV9 151 aa15.37■□□□□ 0.05
HMGN1-206ENST00000431390 SPIN3Q5JUX0 258 aa15.37■□□□□ 0.05
HMGN1-206ENST00000431390 ZNF57Q68EA5 555 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-206ENST00000431390 MOGAT3Q86VF5 341 aa15.37■□□□□ 0.05
HMGN1-206ENST00000431390 TOMM5Q8N4H5 51 aa15.37■□□□□ 0.05
HMGN1-206ENST00000431390 POC5Q8NA72 575 aa15.37■□□□□ 0.05
HMGN1-206ENST00000431390 Q8TCH9 128 aa15.37■□□□□ 0.05
HMGN1-206ENST00000431390 SPOCK3Q9BQ16 436 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms