RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 BNIP2Q12982 314 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 BAMBIQ13145 260 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 MPPED2Q15777 294 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 SYPL1Q16563 259 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 XKR7Q5GH72 579 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 MRPL2Q5T653 305 aaKnown RBP2.8□□□□□ -1.96
PTPN4-204ENST00000431283 CARD17Q5XLA6 110 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 SAXO2Q658L1 398 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 ZNF621Q6ZSS3 439 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 DPPA2Q7Z7J5 298 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 HMGN2P46Q86SG4 172 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 RIMKLAQ8IXN7 391 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 C20orf196Q8IYI0 205 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 LRRC34Q8IZ02 419 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 C4orf33Q8N1A6 199 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 KDM8Q8N371 416 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 ANKFN1Q8N957 763 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 SYT14Q8NB59 555 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 NHLRC2Q8NBF2 726 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 OR6M1Q8NGM8 313 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 OR6N1Q8NGY5 312 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 OR52P1PQ8NH57 321 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 SYNPRQ8TBG9 265 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 ST7LQ8TDW4 575 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 ADAMTS16Q8TE57 1224 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 CCL17Q92583 94 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 SLC38A4Q969I6 547 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 TESCQ96BS2 214 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 CXorf58Q96LI9 332 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 PANX1Q96RD7 426 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 GAL3ST1Q99999 423 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 RTBDNQ9BSG5 229 aaPredicted RBP2.8□□□□□ -1.96
PTPN4-204ENST00000431283 ULBP2Q9BZM5 246 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 BCL2L14Q9BZR8 327 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 C1orf198Q9H425 327 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 ZNF331Q9NQX6 463 aaPredicted RBP2.8□□□□□ -1.96
PTPN4-204ENST00000431283 MED29Q9NX70 200 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 TAAR3PQ9P1P4 343 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 P2RX2Q9UBL9 471 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 BTNL2Q9UIR0 455 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 FZR1Q9UM11 496 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 IFT52Q9Y366 437 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 PPIAL4AQ9Y536 164 aa2.8□□□□□ -1.96
PTPN4-204ENST00000431283 TRAV36DV7A0A075B6V5 113 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 PPIAL4EA0A075B759 164 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 A0A0A6YYD4 124 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 PPIAL4CA0A0B4J2A2 164 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 A0A1B0GUS0 222 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 LOC102725191A0A1B0GVB3 256 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 C5orf58C9J3I9 102 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 PPIAL4DF5H284 164 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 RFXANKO14593 260 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 NPIPB7O75200 414 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 RP2O75695 350 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 ANP32DO95626 131 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 IGHV3-23P01764 117 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 IL6P05231 212 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 CRYBA1P05813 215 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 OR8G3PP0DMU2 310 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 PPIAL4FP0DN26 164 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 B4GALT1P15291 398 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 ZNF250P15622 560 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 ZNF14P17017 642 aaPredicted RBP2.79□□□□□ -1.96
PTPN4-204ENST00000431283 RPS4Y1P22090 263 aaKnown RBP2.79□□□□□ -1.96
PTPN4-204ENST00000431283 AHCYP23526 432 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 ACAA2P42765 397 aaKnown RBP2.79□□□□□ -1.96
PTPN4-204ENST00000431283 CRATP43155 626 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 ALDH3B2P48448 385 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 CSNK1A1P48729 337 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 RPL14P50914 215 aaKnown RBP2.79□□□□□ -1.96
PTPN4-204ENST00000431283 AQP5P55064 265 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 NCALDP61601 193 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 LCN2P80188 198 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 PUDPQ08623 228 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 IFFO1Q0D2I5 559 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 FUT5Q11128 374 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 PMS2P3Q13401 168 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 CASP8Q14790 479 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 MAD2L1BPQ15013 274 aaPredicted RBP2.79□□□□□ -1.96
PTPN4-204ENST00000431283 CHI3L2Q15782 390 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 TBC1D28Q2M2D7 210 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 ALKBH6Q3KRA9 238 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 SLC36A2Q495M3 483 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 SPATA46Q5T0L3 261 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 AVPI1Q5T686 147 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 TMEM53Q6P2H8 277 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 ULK3Q6PHR2 472 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 PRSS48Q7RTY5 328 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 PIWIL3Q7Z3Z3 882 aaKnown RBP2.79□□□□□ -1.96
PTPN4-204ENST00000431283 LRP11Q86VZ4 500 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 NUDCD3Q8IVD9 361 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 WDFY1Q8IWB7 410 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 SPICQ8N5J4 248 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 C10orf53Q8N6V4 93 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 SIGLECL1Q8N7X8 197 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 ZDHHC22Q8N966 263 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 SLC30A7Q8NEW0 376 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 TCP10LQ8TDR4 215 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 DNAJA4Q8WW22 397 aaPredicted RBP2.79□□□□□ -1.96
PTPN4-204ENST00000431283 C22orf15Q8WYQ4 148 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms