RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 RAB26Q9ULW5 256 aa12.53□□□□□ -0.4
PTCD1-204ENST00000430982 TRBV5-5A0A0J9YX44 114 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 ALX3O95076 343 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 TMEM225BP0DP42 221 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 MMP9P14780 707 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 PRKACAP17612 351 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 CELP19835 753 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 DUSP1P28562 367 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 SLC35A2P78381 396 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 COL10A1Q03692 680 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 KISS1Q15726 138 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 Q499Y3 187 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 GPR157Q5UAW9 335 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 RNLSQ5VYX0 342 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 ASPHD2Q6ICH7 369 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 CMTM4Q8IZR5 234 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 FAM185AQ8N0U4 392 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 BCL6BQ8N143 479 aaPredicted RBP12.52□□□□□ -0.41
PTCD1-204ENST00000430982 ASCC1Q8N9N2 400 aaKnown RBP12.52□□□□□ -0.41
PTCD1-204ENST00000430982 ORAI1Q96D31 301 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 JMJD8Q96S16 334 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 CDCA4Q9BXL8 241 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 CCDC90BQ9GZT6 254 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 SIRPDQ9H106 197 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 IL36RNQ9UBH0 155 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 PCDHGB5Q9Y5G0 923 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 KPTNQ9Y664 436 aa12.52□□□□□ -0.41
PTCD1-204ENST00000430982 IGKV1-12A0A0C4DH73 117 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 RGS10O43665 173 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 HAND1O96004 215 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 IGKV1D-12P01611 117 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 CHRM2P08172 466 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 RPS11P62280 158 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTCD1-204ENST00000430982 ZNF529Q6P280 563 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 TREML4Q6UXN2 200 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 OR52N4Q8NGI2 321 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 C8orf46Q8TAG6 207 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 LHX4Q969G2 390 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 CPNE2Q96FN4 548 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-204ENST00000430982 OR5M11Q96RB7 305 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 NKX3-1Q99801 234 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-204ENST00000430982 DUSP21Q9H596 190 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 GLS2Q9UI32 602 aa12.51□□□□□ -0.41
PTCD1-204ENST00000430982 TRBV23-1A0A0A0MS06 115 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 A0A1W2PPK0 400 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 KDM4BO94953 1096 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 TK1P04183 234 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 CRHBPP24387 322 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 BDKRB2P30411 391 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 ZP1P60852 638 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 BDH1Q02338 343 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 IRF3Q14653 427 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 PDCD1Q15116 288 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 SPHARQ15513 63 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 MED22Q15528 200 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 DDI2Q5TDH0 399 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 RUSC1-AS1Q66K80 236 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 CRIP3Q6Q6R5 217 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 RBMS3Q6XE24 437 aaKnown RBP12.5□□□□□ -0.41
PTCD1-204ENST00000430982 BRD3OSQ6XYD6 125 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 VMO1Q7Z5L0 202 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 PDZD9Q8IXQ8 264 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 SAXO1Q8IYX7 474 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 KIR3DL3Q8N743 410 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 SIGLECL1Q8N7X8 197 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 ZSCAN4Q8NAM6 433 aaPredicted RBP12.5□□□□□ -0.41
PTCD1-204ENST00000430982 OR4M1Q8NGD0 313 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 TNFAIP8L1Q8WVP5 186 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 OR14A2Q96R54 314 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 FAM192AQ9GZU8 254 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 HMG20AQ9NP66 347 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 TMEM138Q9NPI0 162 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 ESM1Q9NQ30 184 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 SIRT7Q9NRC8 400 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 C19orf12Q9NSK7 152 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 CKLFQ9UBR5 152 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 GSTK1Q9Y2Q3 226 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 SOX21Q9Y651 276 aaPredicted RBP12.5□□□□□ -0.41
PTCD1-204ENST00000430982 NOTCH1P46531 2555 aa12.5□□□□□ -0.41
PTCD1-204ENST00000430982 TRBV5-7A0A0A0MS05 114 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 K7N7A8 449 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 GABRPO00591 440 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 CD1AP06126 327 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 GABRR1P24046 479 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 EEF1B2P24534 225 aaKnown RBP12.49□□□□□ -0.41
PTCD1-204ENST00000430982 RPL31P62899 125 aaKnown RBP12.49□□□□□ -0.41
PTCD1-204ENST00000430982 PRB3Q04118 309 aaPredicted RBP12.49□□□□□ -0.41
PTCD1-204ENST00000430982 ACSM1Q08AH1 577 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 BLMHQ13867 455 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 SPIN3Q5JUX0 258 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 RBM48Q5RL73 367 aaKnown RBP12.49□□□□□ -0.41
PTCD1-204ENST00000430982 ZDHHC22Q8N966 263 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 DMRTB1Q96MA1 342 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 ZNF184Q99676 751 aaPredicted RBP12.49□□□□□ -0.41
PTCD1-204ENST00000430982 FAM234AQ9H0X4 552 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 Q9H521 79 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 EXOSC4Q9NPD3 245 aaKnown RBP12.49□□□□□ -0.41
PTCD1-204ENST00000430982 BLOC1S6Q9UL45 172 aa12.49□□□□□ -0.41
PTCD1-204ENST00000430982 LSM2Q9Y333 95 aaKnown RBP12.49□□□□□ -0.41
PTCD1-204ENST00000430982 DOCK11Q5JSL3 2073 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms