RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 FGF12P61328 243 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 SRSF7Q16629 238 aaKnown RBP eCLIP11.98□□□□□ -0.49
HOXC4-202ENST00000430889 HIKESHIQ53FT3 197 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 BRICD5Q6PL45 260 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 RRNAD1Q96FB5 475 aaKnown RBP11.98□□□□□ -0.49
HOXC4-202ENST00000430889 PHYHIPLQ96FC7 376 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 C2orf50Q96LR7 162 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 SLC25A32Q9H2D1 315 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 SDHAF2Q9NX18 166 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 ZNF629Q9UEG4 869 aaPredicted RBP11.98□□□□□ -0.49
HOXC4-202ENST00000430889 SHANK1Q9Y566 2161 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 C13orf42A0A1B0GVH6 325 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 CD300LBA8K4G0 201 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 PRSS44E7EML9 344 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 IFNA2P01563 188 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 CCNOP22674 350 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 PMP22Q01453 160 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 ATXN7L3Q14CW9 347 aaPredicted RBP11.97□□□□□ -0.49
HOXC4-202ENST00000430889 PRSS54Q6PEW0 395 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 EIF4E3Q8N5X7 224 aaKnown RBP11.97□□□□□ -0.49
HOXC4-202ENST00000430889 NAXEQ8NCW5 288 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 BHLHE23Q8NDY6 225 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 OR5A2Q8NGI9 324 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 STOML3Q8TAV4 291 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 OR5P3Q8WZ94 311 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 GMPPAQ96IJ6 420 aaPredicted RBP11.97□□□□□ -0.49
HOXC4-202ENST00000430889 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 C12orf49Q9H741 205 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 ZNF286AQ9HBT8 521 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 C12orf4Q9NQ89 552 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 MTCH1Q9NZJ7 389 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 ESPL1Q14674 2120 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 POM121CA8CG34 1229 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 A8MXK9 166 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 GPM6AP51674 278 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 LUMP51884 338 aaPredicted RBP11.97□□□□□ -0.49
HOXC4-202ENST00000430889 UCP3P55916 312 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 PLP2Q04941 152 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 CLN3Q13286 438 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 RBM39Q14498 530 aaKnown RBP11.97□□□□□ -0.49
HOXC4-202ENST00000430889 PDCD1Q15116 288 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 TFAP2EQ6VUC0 442 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 MDP1Q86V88 176 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 FDCSPQ8NFU4 85 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 SLAMF9Q96A28 289 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 MOB3AQ96BX8 217 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 PIK3IP1Q96FE7 263 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 GALNT14Q96FL9 552 aa11.97□□□□□ -0.49
HOXC4-202ENST00000430889 BARX1Q9HBU1 254 aaPredicted RBP11.97□□□□□ -0.49
HOXC4-202ENST00000430889 FAM221AA4D161 298 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 ZNF732B4DXR9 585 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 TPD52L2O43399 206 aaKnown RBP11.96□□□□□ -0.5
HOXC4-202ENST00000430889 LILRA1O75019 489 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 NAPSAO96009 420 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 KNG1P01042 644 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 FGF2P09038 288 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 ZNF14P17017 642 aaPredicted RBP11.96□□□□□ -0.5
HOXC4-202ENST00000430889 HAAOP46952 286 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 PLEKHN1Q494U1 663 aaPredicted RBP11.96□□□□□ -0.5
HOXC4-202ENST00000430889 BEX5Q5H9J7 111 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 SLC22A25Q6T423 547 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 HSD17B13Q7Z5P4 300 aaPredicted RBP11.96□□□□□ -0.5
HOXC4-202ENST00000430889 PDZD9Q8IXQ8 264 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 AQP10Q96PS8 301 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 ARPC5LQ9BPX5 153 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 CYTL1Q9NRR1 136 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 C1orf123Q9NWV4 160 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 OR5AC2Q9NZP5 309 aa11.96□□□□□ -0.5
HOXC4-202ENST00000430889 J3QW42 95 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 KCNAB3O43448 404 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 APLNRP35414 380 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 NAAAQ02083 359 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 TMEM187Q14656 261 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 MPV17LQ2QL34 196 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 SGPP2Q8IWX5 399 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 LRTM2Q8N967 370 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 INO80EQ8NBZ0 244 aaPredicted RBP11.95□□□□□ -0.5
HOXC4-202ENST00000430889 RELL2Q8NC24 303 aaPredicted RBP11.95□□□□□ -0.5
HOXC4-202ENST00000430889 NANOS1Q8WY41 292 aaKnown RBP11.95□□□□□ -0.5
HOXC4-202ENST00000430889 DCUN1D4Q92564 292 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 EXTL1Q92935 676 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 C1QTNF6Q9BXI9 259 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 GLRX2Q9NS18 164 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 TUBD1Q9UJT1 453 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 MPC1Q9Y5U8 109 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 CELSR3Q9NYQ7 3312 aa11.95□□□□□ -0.5
HOXC4-202ENST00000430889 MSGN1A6NI15 193 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 SYNGR1O43759 233 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 WISP2O76076 250 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 OR7C1O76099 320 aaPredicted RBP11.94□□□□□ -0.5
HOXC4-202ENST00000430889 ZNF728P0DKX0 622 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 ZP3P21754 424 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 RBMXP38159 391 aaKnown RBP11.94□□□□□ -0.5
HOXC4-202ENST00000430889 RAB32Q13637 225 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 FBXW12Q6X9E4 464 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 MYPOPQ86VE0 399 aaPredicted RBP11.94□□□□□ -0.5
HOXC4-202ENST00000430889 MKXQ8IYA7 352 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 SLC30A7Q8NEW0 376 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 BOD1Q96IK1 185 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 MICU1Q9BPX6 476 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms