RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 TMEM246Q9BRR3 403 aa9.21□□□□□ -0.94
CHD4-202ENST00000430771 URM1Q9BTM9 101 aaKnown RBP9.21□□□□□ -0.94
CHD4-202ENST00000430771 NARFLQ9H6Q4 476 aa9.21□□□□□ -0.94
CHD4-202ENST00000430771 ZNF665Q9H7R5 613 aa9.21□□□□□ -0.94
CHD4-202ENST00000430771 TMEM165Q9HC07 324 aa9.21□□□□□ -0.94
CHD4-202ENST00000430771 BATF3Q9NR55 127 aa9.21□□□□□ -0.94
CHD4-202ENST00000430771 FBLN5Q9UBX5 448 aa9.21□□□□□ -0.94
CHD4-202ENST00000430771 MIOXQ9UGB7 285 aa9.21□□□□□ -0.94
CHD4-202ENST00000430771 ITGB1BP2Q9UKP3 347 aa9.21□□□□□ -0.94
CHD4-202ENST00000430771 ST3GAL6Q9Y274 331 aa9.21□□□□□ -0.94
CHD4-202ENST00000430771 TMEM272A0A1B0GTI8 110 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A10PA6NDY2 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A18PA6NE21 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A16PA6NEW6 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A20PA6NIJ5 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A8PA6NJQ4 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A7PA6NKC0 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 RFPL4AA6NLU0 287 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A22PA8MWA6 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A12PA8MX19 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A5PA8MXJ8 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A23PA8MXZ1 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 RFPL4AL1F8VTS6 287 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 F8VVB4 439 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 F8VWA3 439 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 TMPRSS2O15393 492 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 ADAM20O43506 726 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 SCGNO76038 276 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A15PP0C7V4 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A13PP0C7W8 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A14PP0C7W9 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 FAM90A24PP0C7X0 464 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 SLC2A2P11168 524 aaPredicted RBP9.2□□□□□ -0.94
CHD4-202ENST00000430771 ZNF44P15621 663 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 RAB6AP20340 208 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 USF1P22415 310 aaPredicted RBP9.2□□□□□ -0.94
CHD4-202ENST00000430771 IL13RA1P78552 427 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 HOXA4Q00056 320 aaPredicted RBP9.2□□□□□ -0.94
CHD4-202ENST00000430771 IKZF1Q13422 519 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 UNC119Q13432 240 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 PIGYQ3MUY2 71 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 ZNF561Q8N587 486 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 CHST4Q8NCG5 386 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 CLDND2Q8NHS1 167 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 ANGPTL6Q8NI99 470 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 PPP1R35Q8TAP8 253 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 ACOT12Q8WYK0 555 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 PTX4Q96A99 478 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 SEH1LQ96EE3 360 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 NEIL1Q96FI4 390 aaPredicted RBP9.2□□□□□ -0.94
CHD4-202ENST00000430771 POM121Q96HA1 1249 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 Q96M66 194 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 SELENOIQ9C0D9 397 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 KCNK15Q9H427 330 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 SEBOXQ9HB31 216 aaPredicted RBP9.2□□□□□ -0.94
CHD4-202ENST00000430771 SPACA1Q9HBV2 294 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 IL36RNQ9UBH0 155 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 KAAG1Q9UBP8 84 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 ZNF222Q9UK12 451 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 PDZD2O15018 2839 aa9.2□□□□□ -0.94
CHD4-202ENST00000430771 IGKV1D-17A0A075B6S4 117 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 IGHV4-61A0A0C4DH41 118 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 A0A1W2PP11 408 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 F5H0A9 414 aaPredicted RBP9.19□□□□□ -0.94
CHD4-202ENST00000430771 SH2D1BO14796 132 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 SIGLEC5O15389 551 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 OR7C1O76099 320 aaPredicted RBP9.19□□□□□ -0.94
CHD4-202ENST00000430771 IGHV2-5P01817 119 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 CHRM2P08172 466 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 SNRPBP14678 240 aaKnown RBP9.19□□□□□ -0.94
CHD4-202ENST00000430771 ZNF182P17025 639 aaPredicted RBP9.19□□□□□ -0.94
CHD4-202ENST00000430771 GABRR1P24046 479 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 RBMXP38159 391 aaKnown RBP9.19□□□□□ -0.94
CHD4-202ENST00000430771 NPY4RP50391 375 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 RPS27AP62979 156 aaKnown RBP9.19□□□□□ -0.94
CHD4-202ENST00000430771 LOXL1Q08397 574 aaPredicted RBP9.19□□□□□ -0.94
CHD4-202ENST00000430771 C2orf76Q3KRA6 126 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 ESCO2Q56NI9 601 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 LRRC10Q5BKY1 277 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 ATPAF1Q5TC12 328 aaPredicted RBP9.19□□□□□ -0.94
CHD4-202ENST00000430771 MZT2AQ6P582 158 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 ZNF788Q6ZQV5 615 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 ASCC1Q8N9N2 400 aaKnown RBP9.19□□□□□ -0.94
CHD4-202ENST00000430771 TMEM104Q8NE00 496 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 WFDC11Q8NEX6 87 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 TMEM185AQ8NFB2 350 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 OR5T2Q8NGG2 359 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 DGCR14Q96DF8 476 aaKnown RBP9.19□□□□□ -0.94
CHD4-202ENST00000430771 SDSLQ96GA7 329 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 MED30Q96HR3 178 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 GAFA1Q96PS6 74 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 TM2D1Q9BX74 207 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 REG4Q9BYZ8 158 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 FAM234AQ9H0X4 552 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 BANF2Q9H503 90 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 PATZ1Q9HBE1 687 aaKnown RBP9.19□□□□□ -0.94
CHD4-202ENST00000430771 OR5V1Q9UGF6 321 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 RAB22AQ9UL26 194 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 SPATA2Q9UM82 520 aa9.19□□□□□ -0.94
CHD4-202ENST00000430771 A0A0B4J203 849 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms