RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 IGKV3D-11A0A0A0MRZ8 115 aa10.15□□□□□ -0.79
PTCH1-208ENST00000430669 ICMTO60725 284 aa10.15□□□□□ -0.79
PTCH1-208ENST00000430669 CNIH1O95406 144 aa10.15□□□□□ -0.79
PTCH1-208ENST00000430669 PCOLCEQ15113 449 aa10.15□□□□□ -0.79
PTCH1-208ENST00000430669 BAP18Q8IXM2 172 aa10.15□□□□□ -0.79
PTCH1-208ENST00000430669 OR52B4Q8NGK2 314 aa10.15□□□□□ -0.79
PTCH1-208ENST00000430669 PGLYRP3Q96LB9 341 aa10.15□□□□□ -0.79
PTCH1-208ENST00000430669 DHRS9Q9BPW9 319 aa10.15□□□□□ -0.79
PTCH1-208ENST00000430669 PPP1R14DQ9NXH3 145 aa10.15□□□□□ -0.79
PTCH1-208ENST00000430669 PSENENQ9NZ42 101 aa10.15□□□□□ -0.79
PTCH1-208ENST00000430669 CD96P40200 585 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 ZNF83P51522 516 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 ERGIC1Q969X5 290 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 ADRB1P08588 477 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 BPIFB3P59826 476 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 RPUSD3Q6P087 351 aaKnown RBP10.14□□□□□ -0.79
PTCH1-208ENST00000430669 MUC20Q8N307 709 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-208ENST00000430669 POM121Q96HA1 1249 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 LYZL6O75951 148 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 CTSDP07339 412 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-208ENST00000430669 HFEQ30201 348 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 ZNF808Q8N4W9 903 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-208ENST00000430669 SFT2D1Q8WV19 159 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 POM121L2Q96KW2 1035 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 ANXA10Q9UJ72 324 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 IGLV3-12A0A075B6K2 115 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 GALR2O43603 387 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-208ENST00000430669 SOX15O60248 233 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 HLA-DOBP13765 273 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 PDZK1IP1Q13113 114 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 OTPQ5XKR4 325 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 ADTRPQ96IZ2 230 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 TRIM77I1YAP6 450 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 C19orf12Q9NSK7 152 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 MMP26Q9NRE1 261 aa10.14□□□□□ -0.79
PTCH1-208ENST00000430669 C3orf85A0A1B0GTC6 90 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 CEACAM6P40199 344 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 PPP1R1AQ13522 171 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 NRN1LQ496H8 165 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 ZBTB34Q8NCN2 500 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 NGFP01138 241 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 EXOSC2Q13868 293 aaKnown RBP10.13□□□□□ -0.79
PTCH1-208ENST00000430669 C6orf201Q7Z4U5 140 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 OR5M8Q8NGP6 311 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 FLVCR1-AS1Q8TAF5 88 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 SHARPINQ9H0F6 387 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 RAB1BQ9H0U4 201 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 NDUFB3O43676 98 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 FTH1P19P0C7X4 201 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 CLLU1Q5K131 121 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 OR2T2Q6IF00 324 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 CXorf58Q96LI9 332 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 UCN2Q96RP3 112 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 GFOD1Q9NXC2 390 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 TRAV8-7A0A075B6U6 113 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 TNFSF12O43508 249 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 CA5BP1Q8WTZ4 195 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 CMBLQ96DG6 245 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 ARV1Q9H2C2 271 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 ZNF230Q9UIE0 474 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-208ENST00000430669 ATPIF1Q9UII2 106 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 CLEC18AA5D8T8 446 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 PRR33A8MZF0 331 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 ANGPTL7O43827 346 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 COX5AP20674 150 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 FAM122BQ7Z309 247 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 CLEC18CQ8NCF0 446 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 A0A1B0GTH9 108 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 NPIPB9F8W1W9 429 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 MS4A18H0YCH9 400 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 MS4A18Q3C1V0 323 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 HSD17B11Q8NBQ5 300 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 SPSB2Q99619 263 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 MDFIC2A0A1B0GVS7 189 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 DUXBA0A1W2PPF3 345 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 NME2P1O60361 137 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 NANOS3P60323 173 aaKnown RBP10.13□□□□□ -0.79
PTCH1-208ENST00000430669 TNFAIP6P98066 277 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-208ENST00000430669 VAX1Q5SQQ9 334 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 OR4A4PQ8NGN8 299 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 COMMD5Q9GZQ3 224 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 ALX4Q9H161 411 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-208ENST00000430669 HS3ST3B1Q9Y662 390 aa10.13□□□□□ -0.79
PTCH1-208ENST00000430669 IGLV1-36A0A0B4J1U3 117 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 A0A1W2PQM1 296 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A10PA6NDY2 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A18PA6NE21 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A16PA6NEW6 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A20PA6NIJ5 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A8PA6NJQ4 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A7PA6NKC0 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A22PA8MWA6 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A12PA8MX19 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A5PA8MXJ8 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A23PA8MXZ1 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 CST4P01036 141 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 MT-ND4LP03901 98 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 SNRNP70P08621 437 aaKnown RBP10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A15PP0C7V4 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A13PP0C7W8 464 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms