RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	RBFOX1	Q9NWB1	397 aa	Known RBP	14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	PLXNB1	O43157	2135 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	TET2	Q6N021	2002 aa	Predicted RBP	14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	SNTN	A6NMZ2	147 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	OR4C45	A6NMZ5	311 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	INMT	O95050	263 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	IGHA1	P01876	353 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	MT-ND2	P03891	347 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	IGHV1-8	P0DP01	117 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	KIR2DS4	P43632	304 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	EDDM3B	P56851	147 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	ACTA2	P62736	377 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	ACTG2	P63267	376 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	MEF2C	Q06413	473 aa	Predicted RBP	14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	LY6E	Q16553	131 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	ZNF626	Q68DY1	528 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	CCDC121	Q6ZUS5	278 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	LHFPL2	Q6ZUX7	228 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	FAM58A	Q8N1B3	248 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	OR11H6	Q8NGC7	330 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	OR52N4	Q8NGI2	321 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	SPSB1	Q96BD6	273 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	RANBP3	Q9H6Z4	567 aa	Predicted RBP	14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	HHLA2	Q9UM44	414 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	TBL2	Q9Y4P3	447 aa	Known RBP	14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738	GMPPB	Q9Y5P6	360 aa		14.35	□□□□□ -0.11
MRPL28-203	ENST00000429738		G3V4G9	280 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738		J3QLW9	94 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	PSPN	O60542	156 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	DBT	P11182	482 aa	Known RBP	14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	ZNF19	P17023	458 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	ZNF20	P17024	532 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	BCL3	P20749	454 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	POU3F4	P49335	361 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	EFNB2	P52799	333 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	MTCP1	P56278	107 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	LGALS4	P56470	323 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	PDZK1IP1	Q13113	114 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	ALKBH1	Q13686	389 aa	Known RBP	14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	GALE	Q14376	348 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	SPIN3	Q5JUX0	258 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	LDLRAD2	Q5SZI1	272 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	KPRP	Q5T749	579 aa	Predicted RBP	14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	LIAT1	Q6ZQX7	453 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	DYNAP	Q8N1N2	210 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	OR13D1	Q8NGV5	346 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	RHOXF1	Q8NHV9	184 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	ZNF714	Q96N38	554 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	OPALIN	Q96PE5	141 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	SLC29A1	Q99808	456 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	C9orf16	Q9BUW7	83 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	RAB18	Q9NP72	206 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	MYRF	Q9Y2G1	1151 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	LINC00312	Q9Y6C7	94 aa		14.34	□□□□□ -0.11
MRPL28-203	ENST00000429738	KIAA2026	Q5HYC2	2103 aa		14.33	□□□□□ -0.11
MRPL28-203	ENST00000429738	IGKV1-12	A0A0C4DH73	117 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	MEX3A	A1L020	520 aa	Known RBP	14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	CHST1	O43916	411 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	MPZL2	O60487	215 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	CYB5A	P00167	134 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	IGKV1D-12	P01611	117 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	PEX2	P28328	305 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	GABRA5	P31644	462 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	RNF144B	Q7Z419	303 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	LHFPL3	Q86UP9	236 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	C10orf67	Q8IYJ2	551 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	SYS1	Q8N2H4	156 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	ALG8	Q9BVK2	526 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	CHST6	Q9GZX3	395 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	HMG20A	Q9NP66	347 aa		14.33	□□□□□ -0.12
MRPL28-203	ENST00000429738	hADV38S2	A0JD32	116 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	MGST3	O14880	152 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	KDM4B	O94953	1096 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	ARG1	P05089	322 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	PRKACA	P17612	351 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	DUSP1	P28562	367 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	ERP29	P30040	261 aa	Known RBP	14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	OR3A1	P47881	315 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	EDDM3A	Q14507	147 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	GRK1	Q15835	563 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738		Q6ZPA2	131 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	TPRX1	Q8N7U7	411 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	OR4S1	Q8NGB4	309 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	OR13C3	Q8NGS6	347 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	FOXRED1	Q96CU9	486 aa	Predicted RBP	14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	MALSU1	Q96EH3	234 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	MRPL48	Q96GC5	212 aa	Known RBP	14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	MYCBP	Q99417	103 aa	Predicted RBP	14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	CDCA4	Q9BXL8	241 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	COMMD4	Q9H0A8	199 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	ISG20L2	Q9H9L3	353 aa	Known RBP	14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	S100A14	Q9HCY8	104 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	MRPS18A	Q9NVS2	196 aa	Known RBP	14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	SIGLEC9	Q9Y336	463 aa		14.32	□□□□□ -0.12
MRPL28-203	ENST00000429738	LOC100130705	A0A1B0GUX0	176 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	OPN1MW	P04001	364 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	OPN1MW2	P0DN77	364 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	OPN1MW3	P0DN78	364 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	GABRR1	P24046	479 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	LMO1	P25800	156 aa		14.31	□□□□□ -0.12

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms