RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 TCTEX1D1Q8N7M0 179 aa12.76□□□□□ -0.37
SYNGAP1-203ENST00000428982 RHBDD1Q8TEB9 315 aa12.76□□□□□ -0.37
SYNGAP1-203ENST00000428982 SLC25A43Q8WUT9 341 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-203ENST00000428982 RNF126Q9BV68 326 aa12.76□□□□□ -0.37
SYNGAP1-203ENST00000428982 STRADBQ9C0K7 418 aa12.76□□□□□ -0.37
SYNGAP1-203ENST00000428982 CTDSP1Q9GZU7 261 aa12.76□□□□□ -0.37
SYNGAP1-203ENST00000428982 IL6RP08887 468 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-203ENST00000428982 MMP9P14780 707 aa12.76□□□□□ -0.37
SYNGAP1-203ENST00000428982 EFNB2P52799 333 aa12.76□□□□□ -0.37
SYNGAP1-203ENST00000428982 FGF11Q92914 225 aa12.76□□□□□ -0.37
SYNGAP1-203ENST00000428982 STARD4Q96DR4 205 aa12.76□□□□□ -0.37
SYNGAP1-203ENST00000428982 ULBP3Q9BZM4 244 aa12.76□□□□□ -0.37
SYNGAP1-203ENST00000428982 STAG3L3P0CL85 134 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 ZCCHC14Q8WYQ9 949 aaKnown RBP12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 NMNAT2Q9BZQ4 307 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 MEGF9Q9H1U4 602 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 STARD5Q9NSY2 213 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 PRR13Q9NZ81 148 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 TRAPPC1Q9Y5R8 145 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 NTN1O95631 604 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 IGHV4-34P06331 123 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 RPS4Y1P22090 263 aaKnown RBP12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 OMGP23515 440 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 MRPS34P82930 218 aaKnown RBP12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 ADGRE4PQ86SQ3 457 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 RBMXL1Q96E39 390 aaKnown RBP12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 OR10C1Q96KK4 312 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 DCBLD2Q96PD2 775 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 CLEC5AQ9NY25 188 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 EHFQ9NZC4 300 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 POLR3KQ9Y2Y1 108 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 CHD3Q12873 2000 aaKnown RBP12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 MKI67P46013 3256 aaKnown RBP12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 IGKV1-8A0A0C4DH67 115 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 OR7C2O60412 319 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 SFT2D2O95562 160 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 HLA-GP17693 338 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 FAM3BP58499 235 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 OCIAD2Q56VL3 154 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 CA13Q8N1Q1 262 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 OR4B1Q8NGF8 309 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 FOXD3Q9UJU5 478 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 HHLA2Q9UM44 414 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 LAMTOR2Q9Y2Q5 125 aa12.75□□□□□ -0.37
SYNGAP1-203ENST00000428982 KIAA1671Q9BY89 1806 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 OR4C45A6NMZ5 311 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 FAM166BA8MTA8 275 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 CEBPZOSA8MTT3 80 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 SERPINE3A8MV23 424 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 TNFSF12O43508 249 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 TNFSF13O75888 250 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 IFNA5P01569 189 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 DPY19L4Q7Z388 723 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 C5orf24Q7Z6I8 188 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 TMEM234Q8WY98 164 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 Q96M85 177 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 SMIM7Q9BQ49 75 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 KCNK15Q9H427 330 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 SPAG17Q6Q759 2223 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 NOTCH4Q99466 2003 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 HSD11B1P28845 292 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 IL24Q13007 206 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 UNQ9370/PRO34162Q6UXP9 181 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 C1orf210Q8IVY1 113 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 BAHD1Q8TBE0 780 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 RASD2Q96D21 266 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 OR6C3Q9NZP0 311 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 WIPI2Q9Y4P8 454 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 J3QRE1 110 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 H2BFMP0C1H6 154 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 ZXDAP98168 799 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 WDR25Q64LD2 544 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 NKAIN3Q8N8D7 197 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 APCDD1LQ8NCL9 501 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 ELOVL3Q9HB03 270 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 Q9N2K0 584 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 PLSCR2Q9NRY7 297 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 RND3P61587 244 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 LCN6P62502 163 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 COL9A2Q14055 689 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 ZNF141Q15928 474 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 GATSQ8NAP1 163 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 OR2A5Q96R48 311 aa12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 DNAJB12Q9NXW2 375 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-203ENST00000428982 NPIPA5E9PKD4 350 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 PIN1P1O15428 100 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 CTSSP25774 331 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 NXPH1P58417 271 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 DCAF7P61962 342 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 CSNK2A1P68400 391 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 TMEM268Q5VZI3 342 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 NIT1Q86X76 327 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 FAM58AQ8N1B3 248 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 CSNK2A3Q8NEV1 391 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 SCGB1C1Q8TD33 95 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 SYT3Q9BQG1 590 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 ICAM5Q9UMF0 924 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 NPIPA1Q9UND3 350 aa12.73□□□□□ -0.37
SYNGAP1-203ENST00000428982 SRPK3Q9UPE1 567 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms