RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.05□□□□□ -0.16
C9orf3-206ENST00000428313 LY6G5CQ5SRR4 150 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 SMIM15Q7Z3B0 74 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-206ENST00000428313 OR5AS1Q8N127 324 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 OIT3Q8WWZ8 545 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 ABHD14BQ96IU4 210 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 PECRQ9BY49 303 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 KIR3DX1Q9H7L2 352 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 ELL3Q9HB65 397 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-206ENST00000428313 LYRM2Q9NU23 88 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-206ENST00000428313 CPAMD8Q8IZJ3 1885 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 NRG2O14511 850 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-206ENST00000428313 CCL25O15444 150 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 IGHMP01871 453 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 TAS2R30P59541 319 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 DCAF7P61962 342 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 BAXQ07812 192 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 FBXO46Q6PJ61 603 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-206ENST00000428313 IL22RA1Q8N6P7 574 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 BCORP1Q8N888 145 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 RTN4IP1Q8WWV3 396 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-206ENST00000428313 MOB3AQ96BX8 217 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 MSI2Q96DH6 328 aaKnown RBP14.04□□□□□ -0.16
C9orf3-206ENST00000428313 SDSLQ96GA7 329 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 CAPNS2Q96L46 248 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 TECTBQ96PL2 329 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 PCGF1Q9BSM1 259 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 TRAV39A0A0B4J263 110 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 CDS2O95674 445 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 FREM3P0C091 2139 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 SGCBQ16585 318 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 SP6Q3SY56 376 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 ABCA11PQ4W5N1 156 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 RNF144BQ7Z419 303 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 C17orf78Q8N4C9 275 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 TMEM252Q8N6L7 170 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 OR51T1Q8NGJ9 327 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 RNF133Q8WVZ7 376 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 CYYR1Q96J86 154 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 PBOV1Q9GZY1 135 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 PRSS50Q9UI38 385 aa14.04□□□□□ -0.16
C9orf3-206ENST00000428313 COA3Q9Y2R0 106 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-206ENST00000428313 A0A1W2PP11 408 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 CBR3O75828 277 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 ZNF728P0DKX0 622 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 EPHA8P29322 1005 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-206ENST00000428313 SRP14P37108 136 aaKnown RBP14.03□□□□□ -0.16
C9orf3-206ENST00000428313 WNT5AP41221 380 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 TFPI2P48307 235 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 ADIRFQ15847 76 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 ATP6V1FQ16864 119 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 TOMM20LQ6UXN7 152 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 TMEFF1Q8IYR6 380 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 ZNF248Q8NDW4 579 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 OR5C1Q8NGR4 320 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 REEP6Q96HR9 211 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 SPACA7Q96KW9 195 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 RRAGCQ9HB90 399 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 TMEM106BQ9NUM4 274 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 MRPS2Q9Y399 296 aaKnown RBP14.03□□□□□ -0.16
C9orf3-206ENST00000428313 TRAV36DV7A0A075B6V5 113 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 A0A1W2PQ45 241 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-206ENST00000428313 A0A1W2PQY0 241 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 PRR19A6NJB7 356 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 MT-ATP6P00846 226 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 BSXQ3C1V8 233 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 ACSF3Q4G176 576 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-206ENST00000428313 TPTE2P1Q5T6R2 138 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 CA13Q8N1Q1 262 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 OR10S1Q8NGN2 331 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 KCNE4Q8WWG9 221 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 MBD3L1Q8WWY6 194 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 ANAPC16Q96DE5 110 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 ALKBH3Q96Q83 286 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-206ENST00000428313 SPACA5Q96QH8 159 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 FOXQ1Q9C009 403 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 PLSCR2Q9NRY7 297 aa14.03□□□□□ -0.16
C9orf3-206ENST00000428313 IGKV1D-8A0A087WSZ0 117 aa14.02□□□□□ -0.16
C9orf3-206ENST00000428313 ZFP92A6NM28 416 aa14.02□□□□□ -0.16
C9orf3-206ENST00000428313 HCRTR2O43614 444 aa14.02□□□□□ -0.16
C9orf3-206ENST00000428313 MPZL1O95297 269 aa14.02□□□□□ -0.16
C9orf3-206ENST00000428313 C9orf50Q5SZB4 431 aa14.02□□□□□ -0.16
C9orf3-206ENST00000428313 ZNF787Q6DD87 383 aa14.02□□□□□ -0.16
C9orf3-206ENST00000428313 KLHL24Q6TFL4 600 aa14.02□□□□□ -0.16
C9orf3-206ENST00000428313 CBLN3Q6UW01 205 aa14.02□□□□□ -0.16
C9orf3-206ENST00000428313 NECAP1Q8NC96 275 aa14.02□□□□□ -0.16
C9orf3-206ENST00000428313 OR2T10Q8NGZ9 312 aa14.02□□□□□ -0.16
C9orf3-206ENST00000428313 ZNF701Q9NV72 531 aaPredicted RBP14.02□□□□□ -0.16
C9orf3-206ENST00000428313 CHD3Q12873 2000 aaKnown RBP14.02□□□□□ -0.17
C9orf3-206ENST00000428313 ALPK2Q86TB3 2170 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 METTL12A8MUP2 240 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 IFNL4K9M1U5 179 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 LATO43561 262 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 TOMM40O96008 361 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 CT45A8P0DMV1 189 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 CT45A9P0DMV2 189 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 BLVRBP30043 206 aaPredicted RBP14.02□□□□□ -0.17
C9orf3-206ENST00000428313 CEACAM8P31997 349 aaPredicted RBP14.02□□□□□ -0.17
C9orf3-206ENST00000428313 DYNLT3P51808 116 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms