RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 FAM162BQ5T6X4 162 aa8.8□□□□□ -1
CLTCL1-202ENST00000427926 SLC23A3Q6PIS1 610 aa8.8□□□□□ -1
CLTCL1-202ENST00000427926 VN1R4Q7Z5H5 301 aa8.8□□□□□ -1
CLTCL1-202ENST00000427926 VSTM2LQ96N03 204 aa8.8□□□□□ -1
CLTCL1-202ENST00000427926 ARHGDIGQ99819 225 aa8.8□□□□□ -1
CLTCL1-202ENST00000427926 WNK3Q9BYP7 1800 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 IGHV4-34P06331 123 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 GFRA1P56159 465 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 DUSP18Q8NEJ0 188 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 DOK5Q9P104 306 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 A0A1W2PQF6 199 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 FAM181BA6NEQ2 426 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 ENDOGQ14249 297 aaKnown RBP8.79□□□□□ -1
CLTCL1-202ENST00000427926 HAGHQ16775 308 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 DHRS7BQ6IAN0 325 aaPredicted RBP8.79□□□□□ -1
CLTCL1-202ENST00000427926 OR1B1Q8NGR6 318 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 PLEKHA2Q9HB19 425 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 ADGRL4Q9HBW9 690 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 OOEPA6NGQ2 149 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 SPINT1O43278 529 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 NME2P1O60361 137 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 LIMS3P0CW19 117 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 LIMS4P0CW20 117 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 NTF3P20783 257 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 C1QL3Q5VWW1 255 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 FAM214BQ7L5A3 538 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 LIMS2Q7Z4I7 341 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 SPRED2Q7Z698 418 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 TUBA4BQ9H853 241 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 GPR35Q9HC97 309 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 VSIG4Q9Y279 399 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 IGHV3OR15-7A0A075B7D8 119 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 SELENOPP49908 381 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 SLC25A1P53007 311 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 SLC25A42Q86VD7 318 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 MSL2Q9HCI7 577 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 PARP11Q9NR21 331 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 FOXD3Q9UJU5 478 aaPredicted RBP8.79□□□□□ -1
CLTCL1-202ENST00000427926 YTHDF2Q9Y5A9 579 aaKnown RBP8.79□□□□□ -1
CLTCL1-202ENST00000427926 ZNF727A8MUV8 499 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 CST2P09228 141 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 RPL12P30050 165 aaKnown RBP8.79□□□□□ -1
CLTCL1-202ENST00000427926 LINC00299Q6ZSB3 139 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 ZNF418Q8TF45 676 aaPredicted RBP8.79□□□□□ -1
CLTCL1-202ENST00000427926 FLYWCH2Q96CP2 140 aaKnown RBP8.79□□□□□ -1
CLTCL1-202ENST00000427926 TSPAN32Q96QS1 320 aa8.79□□□□□ -1
CLTCL1-202ENST00000427926 RCL1Q9Y2P8 373 aaKnown RBP8.79□□□□□ -1
CLTCL1-202ENST00000427926 BRWD1Q9NSI6 2320 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 PPP5D1E7EU14 171 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 TFPI2P48307 235 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 RPL31P62899 125 aaKnown RBP8.78□□□□□ -1
CLTCL1-202ENST00000427926 TOR2AQ5JU69 321 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 RNFT1Q5M7Z0 435 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 EBLN2Q6P2I7 272 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 SLC16A12Q6ZSM3 486 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 MDP1Q86V88 176 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 C1orf174Q8IYL3 243 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 PERPQ96FX8 193 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 ZNF552Q9H707 407 aaPredicted RBP8.78□□□□□ -1
CLTCL1-202ENST00000427926 RHOFQ9HBH0 211 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 RYDENQ9NUL5 291 aaKnown RBP8.78□□□□□ -1
CLTCL1-202ENST00000427926 SLC25A37Q9NYZ2 338 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 UFC1Q9Y3C8 167 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 COL5A3P25940 1745 aaPredicted RBP8.78□□□□□ -1
CLTCL1-202ENST00000427926 KNL1Q8NG31 2342 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 COL24A1Q17RW2 1714 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 IGLV3-16A0A075B6K0 115 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 A0A1W2PQD3 144 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 ZAR1LA6NP61 321 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 GPANK1O95872 356 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 GZMHP20718 246 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 CD200P41217 278 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 IZUMO4Q1ZYL8 232 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 ABLIM2Q6H8Q1 611 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 H3F3CQ6NXT2 135 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 OR8I2Q8N0Y5 310 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 SCNM1Q9BWG6 230 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 NCOR1P1Q9H4R4 102 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 UQCC1Q9NVA1 299 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 ACP1P24666 158 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 CD80P33681 288 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 KIR2DL2P43627 348 aaPredicted RBP8.78□□□□□ -1
CLTCL1-202ENST00000427926 YBX1P67809 324 aaKnown RBP8.78□□□□□ -1
CLTCL1-202ENST00000427926 OR2W3Q7Z3T1 314 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 CENPVQ7Z7K6 275 aaPredicted RBP8.78□□□□□ -1
CLTCL1-202ENST00000427926 SPNS2Q8IVW8 549 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 ADAMTS17Q8TE56 1095 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 FAM216AQ8WUB2 273 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 HILPDAQ9Y5L2 63 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 TCRBV5S2A0A599 114 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 PDCD6O75340 191 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 FAM87AP0C7U9 286 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 LAMTOR1Q6IAA8 161 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 NRARPQ7Z6K4 114 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 MTURNQ8N3F0 131 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 OIT3Q8WWZ8 545 aa8.78□□□□□ -1
CLTCL1-202ENST00000427926 IGHV3OR16-12A0A075B7B8 117 aa8.77□□□□□ -1
CLTCL1-202ENST00000427926 TMEM210A6NLX4 147 aa8.77□□□□□ -1
CLTCL1-202ENST00000427926 GSTZ1O43708 216 aaPredicted RBP8.77□□□□□ -1
CLTCL1-202ENST00000427926 S100A11P31949 105 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms