RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CSMD1Q96PZ7 3565 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 AKR7A2O43488 359 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 CD8AP01732 235 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 CBX3Q13185 183 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 RSU1Q15404 277 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 KCNJ8Q15842 424 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 MST1LQ2TV78 715 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 RNASE10Q5GAN6 216 aaKnown RBP13.3□□□□□ -0.28
SHOX2-202ENST00000425436 GLDNQ6ZMI3 551 aaPredicted RBP13.3□□□□□ -0.28
SHOX2-202ENST00000425436 MOB3CQ70IA8 216 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 OR8S1Q8NH09 359 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 NPRL2Q8WTW4 380 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 PIGCQ92535 297 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 OCSTAMPQ9BR26 566 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 MRPL37Q9BZE1 423 aaKnown RBP13.3□□□□□ -0.28
SHOX2-202ENST00000425436 BCL2L14Q9BZR8 327 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 BANF2Q9H503 90 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 ZNF442Q9H7R0 627 aa13.3□□□□□ -0.28
SHOX2-202ENST00000425436 ZMAT3Q9HA38 289 aaKnown RBP13.3□□□□□ -0.28
SHOX2-202ENST00000425436 ELL3Q9HB65 397 aaPredicted RBP13.3□□□□□ -0.28
SHOX2-202ENST00000425436 PAIP2BQ9ULR5 123 aaKnown RBP13.3□□□□□ -0.28
SHOX2-202ENST00000425436 ANKRD17O75179 2603 aaKnown RBP13.3□□□□□ -0.28
SHOX2-202ENST00000425436 FAM230AA0A1W2PPH8 454 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 VSTM5A8MXK1 200 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 SSNA1O43805 119 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 CREBL2O60519 120 aaPredicted RBP13.29□□□□□ -0.28
SHOX2-202ENST00000425436 C1QBP02746 253 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 GNB3P16520 340 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 NAT1P18440 290 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 CRIP3Q6Q6R5 217 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 C20orf204Q6ZNR8 217 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 OR51S1Q8NGJ8 323 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 MARS2Q96GW9 593 aaKnown RBP13.29□□□□□ -0.28
SHOX2-202ENST00000425436 ZNF486Q96H40 463 aaPredicted RBP13.29□□□□□ -0.28
SHOX2-202ENST00000425436 RNF170Q96K19 258 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 CCL19Q99731 98 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 PLK3Q9H4B4 646 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 MYOZ1Q9NP98 299 aaPredicted RBP13.29□□□□□ -0.28
SHOX2-202ENST00000425436 ANAPC10Q9UM13 185 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 UBE2QL1A1L167 161 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 MEIS3P1A6NDR6 274 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 H3BUI4 141 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 MFNGO00587 321 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 SOCS1O15524 211 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 SNAPC5O75971 98 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 SULT1A3P0DMM9 295 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 SULT1A4P0DMN0 295 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 ANXA3P12429 323 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 SERPINA2P20848 420 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 MPV17P39210 176 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 RPS23P62266 143 aaKnown RBP13.29□□□□□ -0.28
SHOX2-202ENST00000425436 GK2Q14410 553 aaPredicted RBP13.29□□□□□ -0.28
SHOX2-202ENST00000425436 HLXQ14774 488 aaPredicted RBP13.29□□□□□ -0.28
SHOX2-202ENST00000425436 FCN2Q15485 313 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 ALKBH6Q3KRA9 238 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 PLCXD3Q63HM9 321 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 UNQ6126/PRO20091Q6UXV3 157 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 RNF144BQ7Z419 303 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 C1QL2Q7Z5L3 287 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 SAXO1Q8IYX7 474 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 BPIFB2Q8N4F0 458 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 OR5D18Q8NGL1 313 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 KLF14Q8TD94 323 aaPredicted RBP13.29□□□□□ -0.28
SHOX2-202ENST00000425436 MRPL24Q96A35 216 aaKnown RBP13.29□□□□□ -0.28
SHOX2-202ENST00000425436 CMBLQ96DG6 245 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 FYTTD1Q96QD9 318 aaKnown RBP13.29□□□□□ -0.28
SHOX2-202ENST00000425436 HIST1H2AAQ96QV6 131 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 NICN1Q9BSH3 213 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 RANBP3Q9H6Z4 567 aaPredicted RBP13.29□□□□□ -0.28
SHOX2-202ENST00000425436 HSF4Q9ULV5 492 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 FLVCR2Q9UPI3 526 aa13.29□□□□□ -0.28
SHOX2-202ENST00000425436 A0A0A6YYD4 124 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 FOXI3A8MTJ6 420 aaPredicted RBP13.28□□□□□ -0.28
SHOX2-202ENST00000425436 A8MV72 311 aaPredicted RBP13.28□□□□□ -0.28
SHOX2-202ENST00000425436 TPD52L2O43399 206 aaKnown RBP13.28□□□□□ -0.28
SHOX2-202ENST00000425436 AMY2AP04746 511 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 IFNA6P05013 189 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 TUBG1P23258 451 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 BLVRBP30043 206 aaPredicted RBP13.28□□□□□ -0.28
SHOX2-202ENST00000425436 TMEM50BP56557 158 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 PRSS12P56730 875 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 MRPS15P82914 257 aaKnown RBP13.28□□□□□ -0.28
SHOX2-202ENST00000425436 PDZK1IP1Q13113 114 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 SWI5Q1ZZU3 235 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 CEACAM21Q3KPI0 293 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 ZNF718Q3SXZ3 478 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 PLAC9Q5JTB6 97 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 FAAP20Q6NZ36 180 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 IDO2Q6ZQW0 420 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 SPICQ8N5J4 248 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 HYLS1Q96M11 299 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 TUBG2Q9NRH3 451 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 CBLN4Q9NTU7 201 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 NOP16Q9Y3C1 178 aaKnown RBP13.28□□□□□ -0.28
SHOX2-202ENST00000425436 MPC1Q9Y5U8 109 aa13.28□□□□□ -0.28
SHOX2-202ENST00000425436 ARFGEF3Q5TH69 2177 aa13.27□□□□□ -0.28
SHOX2-202ENST00000425436 NOTCH2Q04721 2471 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 RLN1P04808 185 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 ZNF250P15622 560 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 GCH1P30793 250 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms