RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 EMG1Q92979 244 aaKnown RBP9.26□□□□□ -0.93
CUX1-205ENST00000425244 TOMM40LQ969M1 308 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 TM2D1Q9BX74 207 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 FAM117AQ9C073 453 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 ESRP2Q9H6T0 727 aaKnown RBP9.26□□□□□ -0.93
CUX1-205ENST00000425244 IGKV1-27A0A075B6S5 117 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 ZNHIT1O43257 154 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 ZNF133P52736 654 aaPredicted RBP9.26□□□□□ -0.93
CUX1-205ENST00000425244 SUCLG1P53597 346 aaKnown RBP9.26□□□□□ -0.93
CUX1-205ENST00000425244 B3GALT5-AS1P59052 145 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 PDCD1Q15116 288 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 PRSS54Q6PEW0 395 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 OR10D3Q8NH80 312 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 KCNE4Q8WWG9 221 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 C2orf50Q96LR7 162 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 Q96M66 194 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 PIGMQ9H3S5 423 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 TMEM38BQ9NVV0 291 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 NCOR2Q9Y618 2525 aa9.26□□□□□ -0.93
CUX1-205ENST00000425244 NBEAQ8NFP9 2946 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 TRBV6-7A0A0A0MS04 114 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 PQLC2LA1A4F0 135 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 FIGNL2A6NMB9 653 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 ZNF850A8MQ14 1090 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 SYNGR3O43761 229 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 IFNA2P01563 188 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 CELA3AP09093 270 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 RPS2P15880 293 aaKnown RBP9.25□□□□□ -0.93
CUX1-205ENST00000425244 CRYGSP22914 178 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 SRD5A2P31213 254 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 FXYD4P59646 89 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 PLGLB1Q02325 96 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 IAH1Q2TAA2 248 aaPredicted RBP9.25□□□□□ -0.93
CUX1-205ENST00000425244 CEACAM16Q2WEN9 425 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 PIGYQ3MUY2 71 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 RPUSD3Q6P087 351 aaKnown RBP9.25□□□□□ -0.93
CUX1-205ENST00000425244 PLXDC2Q6UX71 529 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 STX12Q86Y82 276 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 POC1AQ8NBT0 407 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 ABHD3Q8WU67 409 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 BORCS8Q96FH0 119 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 ZNF552Q9H707 407 aaPredicted RBP9.25□□□□□ -0.93
CUX1-205ENST00000425244 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.25□□□□□ -0.933e-6■■□□□ 13.5
CUX1-205ENST00000425244 CYTL1Q9NRR1 136 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 AK3Q9UIJ7 227 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 LRRC3CA6NJW4 275 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 FAM74A7A6NL05 159 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 F8VVB4 439 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 F8VWA3 439 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 ABCD4O14678 606 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 SCGB1D2O95969 90 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 OR5H8P0DN80 308 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 GLI4P10075 376 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 ARL6IP1Q15041 203 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 FAM74A3Q4VXF1 159 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 GGNQ86UU5 652 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 OR2M7Q8NG81 312 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 FGFBP3Q8TAT2 258 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 STOML3Q8TAV4 291 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 ZNF845Q96IR2 970 aaPredicted RBP9.25□□□□□ -0.93
CUX1-205ENST00000425244 CMSS1Q9BQ75 279 aaKnown RBP9.25□□□□□ -0.93
CUX1-205ENST00000425244 TMEM231Q9H6L2 316 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 GSN-AS1Q9NRJ2 163 aa9.25□□□□□ -0.93
CUX1-205ENST00000425244 ZNF705EA8MWA4 302 aaPredicted RBP9.24□□□□□ -0.93
CUX1-205ENST00000425244 MAGEA5P43359 124 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 PSG4Q00888 419 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 SRYQ05066 204 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 CNN3Q15417 329 aaKnown RBP9.24□□□□□ -0.93
CUX1-205ENST00000425244 C9orf135Q5VTT2 229 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.24□□□□□ -0.93
CUX1-205ENST00000425244 SGPP2Q8IWX5 399 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 WNT2BQ93097 391 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 SPSB1Q96BD6 273 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 TSNAXQ99598 290 aaKnown RBP9.24□□□□□ -0.93
CUX1-205ENST00000425244 FOXB1Q99853 325 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 SF3B5Q9BWJ5 86 aaKnown RBP9.24□□□□□ -0.93
CUX1-205ENST00000425244 ANXA10Q9UJ72 324 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 MEMO1Q9Y316 297 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 MSTNO14793 375 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 GEMIN2O14893 280 aaKnown RBP9.24□□□□□ -0.93
CUX1-205ENST00000425244 NRASP01111 189 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 CST2P09228 141 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 PET100P0DJ07 73 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 RBP2P50120 134 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 RAB13P51153 203 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 RBM39Q14498 530 aaKnown RBP9.24□□□□□ -0.93
CUX1-205ENST00000425244 SP6Q3SY56 376 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 PLEKHN1Q494U1 663 aaPredicted RBP9.24□□□□□ -0.93
CUX1-205ENST00000425244 IGF2-ASQ6U949 168 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 FBXL14Q8N1E6 418 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 SLC30A7Q8NEW0 376 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 OR2V1Q8NHB1 315 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 FNDC9Q8TBE3 224 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 RNF141Q8WVD5 230 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 C10orf35Q96D05 121 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 SULT4A1Q9BR01 284 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 C1orf123Q9NWV4 160 aa9.24□□□□□ -0.93
CUX1-205ENST00000425244 BOKQ9UMX3 212 aaPredicted RBP9.24□□□□□ -0.93
CUX1-205ENST00000425244 TNRC6AQ8NDV7 1962 aaKnown RBP9.24□□□□□ -0.93
CUX1-205ENST00000425244 ZNF716A6NP11 495 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms