RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PTPRGP23470 1445 aa2.93□□□□□ -1.94
SF3B1-205ENST00000424674 ASTN1O14525 1302 aa2.93□□□□□ -1.94
SF3B1-205ENST00000424674 IGHV3OR16-13A0A075B7E8 117 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 TRAV8-2A0A0B4J237 113 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 TRGV8A0A0C4DH27 118 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 A0A1B0GV50 99 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 LINC00587B1AMM8 73 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 SLC17A2O00624 439 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 MYL12BO14950 172 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 AGPAT2O15120 278 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 CRLF1O75462 422 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 TRMUO75648 421 aaKnown RBP2.92□□□□□ -1.94
SF3B1-205ENST00000424674 C6orf47O95873 294 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 PDYNP01213 254 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 OR5H8P0DN80 308 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 ERGP11308 486 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 DDTP30046 118 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 MIPP30301 263 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 PSMB2P49721 201 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 KLK7P49862 253 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 GZMMP51124 257 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 CCR6P51684 374 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 RHOBP62745 196 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 GTF2BQ00403 316 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 IFITM2Q01629 132 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 LAMTOR4Q0VGL1 99 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 ZNF266Q14584 549 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 IHHQ14623 411 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 TMEM255AQ5JRV8 349 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 FAM162BQ5T6X4 162 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 ANKRD22Q5VYY1 191 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 STEAP4Q687X5 459 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 UFSP1Q6NVU6 142 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 DGAT2L6Q6ZPD8 337 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 C3orf62Q6ZUJ4 267 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 FOXL2NBQ6ZUU3 175 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 CALHM3Q86XJ0 350 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 CDC20BQ86Y33 519 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 C1orf158Q8N1D5 194 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 NPWQ8N729 165 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 TMEM178AQ8NBL3 297 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 UBAC2Q8NBM4 344 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 ZNF485Q8NCK3 441 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 OR10D3Q8NH80 312 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 OR1S1Q8NH92 325 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 GRPEL2Q8TAA5 225 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 JOSD2Q8TAC2 188 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 SECTM1Q8WVN6 248 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 CHCHD10Q8WYQ3 142 aaPredicted RBP2.92□□□□□ -1.94
SF3B1-205ENST00000424674 ACY3Q96HD9 319 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 DIRAS2Q96HU8 199 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 PYURFQ96I23 114 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 C2orf88Q9BSF0 95 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 MARVELD1Q9BSK0 173 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 EBPLQ9BY08 206 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 MS4A8Q9BY19 250 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 SLC17A9Q9BYT1 436 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 C20orf85Q9H1P6 137 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 OR51E2Q9H255 320 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 OR51I2Q9H344 312 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 TPT1P8Q9HAU6 139 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 PLSCR3Q9NRY6 295 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 CISHQ9NSE2 258 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 THAP10Q9P2Z0 257 aaPredicted RBP2.92□□□□□ -1.94
SF3B1-205ENST00000424674 XCL2Q9UBD3 114 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 ZNF223Q9UK11 482 aaPredicted RBP2.92□□□□□ -1.94
SF3B1-205ENST00000424674 UBIAD1Q9Y5Z9 338 aa2.92□□□□□ -1.94
SF3B1-205ENST00000424674 YTHDC2Q9H6S0 1430 aaKnown RBP2.92□□□□□ -1.94
SF3B1-205ENST00000424674 CEP152O94986 1710 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 CCNB3Q8WWL7 1395 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 IGHV4-4A0A075B6R2 117 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 IGHV3-38A0A0C4DH36 116 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 TEX48A0A1B0GUV7 120 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 EXOC1LA0A1B0GW35 172 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 RBFOX3A6NFN3 312 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 FOXI3A8MTJ6 420 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 FAM220BPB1ANY3 271 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 D6RAR5 112 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 ATP6V1G2-DDX39BF2Z307 99 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 K7EP13 123 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 UPK2O00526 184 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 XKRYO14609 159 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 RDH16O75452 317 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 CA11O75493 328 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 YIF1AO95070 293 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 TTRP02766 147 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 EIF4EP06730 217 aaKnown RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 TCN2P20062 427 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 KLK2P20151 261 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 VDAC1P21796 283 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 MT3P25713 68 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 AKR1C3P42330 323 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 H2BFSP57053 126 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 HSPE1P61604 102 aaKnown RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 SELENOTP62341 195 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 PRR3P79522 188 aaKnown RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 EBPQ15125 230 aaKnown RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 IRF4Q15306 451 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 SHHQ15465 462 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms