RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 RPS27AP62979 156 aaKnown RBP11.26□□□□□ -0.61
PRPF39-202ENST00000424478 ZMYND11Q15326 602 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 PCGF3Q3KNV8 242 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 LYPD2Q6UXB3 125 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 TPRX1Q8N7U7 411 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 ZNRF1Q8ND25 227 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 KCNG3Q8TAE7 436 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 CPNE2Q96FN4 548 aaPredicted RBP11.26□□□□□ -0.61
PRPF39-202ENST00000424478 ARHGAP5-AS1Q96IT6 56 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 DIRC2Q96SL1 478 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 CCL13Q99616 98 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 HDHD3Q9BSH5 251 aaPredicted RBP11.26□□□□□ -0.61
PRPF39-202ENST00000424478 MMP27Q9H306 513 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 AKAP9Q99996 3911 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 TRAV18A0A075B6X5 111 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 UBE2QL1A1L167 161 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 H7C417 338 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 J3QRK9 145 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 IRF2P14316 349 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 BLVRBP30043 206 aaPredicted RBP11.26□□□□□ -0.61
PRPF39-202ENST00000424478 PITPNBP48739 271 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 TMEM50BP56557 158 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 GUCA2AQ02747 115 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 UBE2NLQ5JXB2 153 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 MZT2AQ6P582 158 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 CROCCP3Q8IVE0 287 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 CD177Q8N6Q3 437 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 FAM216BQ8N7L0 139 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 Q96M66 194 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 TLN2Q9Y4G6 2542 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 IGKV1D-17A0A075B6S4 117 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 RP2O75695 350 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 LHBP01229 141 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 PSG2P11465 335 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 SSTR2P30874 369 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 FGF12P61328 243 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 CDH26Q8IXH8 852 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 CELF2-AS1Q8N7Q2 184 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 FAAP24Q9BTP7 215 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 FLNAP21333 2647 aaKnown RBP11.25□□□□□ -0.61
PRPF39-202ENST00000424478 MALRD1Q5VYJ5 2156 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 TMEM235A6NFC5 223 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 OR2AT4A6NND4 320 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 RAB27BO00194 218 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 S100A5P33763 92 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 ZSCAN4Q8NAM6 433 aaPredicted RBP11.25□□□□□ -0.61
PRPF39-202ENST00000424478 OR11L1Q8NGX0 322 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 MAFIPQ8WZ33 124 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 PPA2Q9H2U2 334 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 DOCK11Q5JSL3 2073 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 ACANP16112 2415 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 MEIOCA2RUB1 952 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 PSPNO60542 156 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 CFPP27918 469 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 MZT1Q08AG7 82 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 IL18Q14116 193 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 ASCC1Q8N9N2 400 aaKnown RBP11.25□□□□□ -0.61
PRPF39-202ENST00000424478 KCTD12Q96CX2 325 aaKnown RBP11.25□□□□□ -0.61
PRPF39-202ENST00000424478 ABHD1Q96SE0 405 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 CXorf56Q9H5V9 222 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 NLKQ9UBE8 527 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 RAB22AQ9UL26 194 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 KCNK7Q9Y2U2 307 aa11.25□□□□□ -0.61
PRPF39-202ENST00000424478 OR2H2O95918 312 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 F12P00748 615 aaPredicted RBP11.24□□□□□ -0.61
PRPF39-202ENST00000424478 ATXN7L3Q14CW9 347 aaPredicted RBP11.24□□□□□ -0.61
PRPF39-202ENST00000424478 TMEM69Q5SWH9 247 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 FAM131AQ6UXB0 335 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 ACOT12Q8WYK0 555 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 PEX16Q9Y5Y5 336 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 ZFHX3Q15911 3703 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 ABCA2Q9BZC7 2435 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 FCN3O75636 299 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 EFNA4P52798 201 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 COL10A1Q03692 680 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 UBALD1Q8TB05 177 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 NUDCD2Q8WVJ2 157 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 SULT4A1Q9BR01 284 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 AUNIPQ9H7T9 357 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 HES4Q9HCC6 221 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 WIPI2Q9Y4P8 454 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 V9GYH0 126 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 TRAV24A0A0B4J272 114 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 LRRC30A6NM36 301 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 TMPRSS2O15393 492 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 HAND1O96004 215 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 PTH2RP49190 550 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 SEC61A1P61619 476 aaKnown RBP11.24□□□□□ -0.61
PRPF39-202ENST00000424478 MAPK1IP1LQ8NDC0 245 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 NEK7Q8TDX7 302 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 S100A16Q96FQ6 103 aaKnown RBP11.24□□□□□ -0.61
PRPF39-202ENST00000424478 ETV7Q9Y603 341 aa11.24□□□□□ -0.61
PRPF39-202ENST00000424478 PPIAL4EA0A075B759 164 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 FABP12A6NFH5 140 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 OOEPA6NGQ2 149 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 PPIAL4DF5H284 164 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 APOA1P02647 267 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 UBBP0CG47 229 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 PPIAL4FP0DN26 164 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 ZNF79Q15937 498 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms