RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 RBFOX3A6NFN3 312 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 C2CD4DB7Z1M9 353 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 PDCD6O75340 191 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 OR2J2O76002 312 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 OR2C1O95371 312 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 HSPB1P04792 205 aaKnown RBP13.21□□□□□ -0.29
C9orf3-204ENST00000424143 EN2P19622 333 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-204ENST00000424143 CDX1P47902 265 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-204ENST00000424143 FUT6P51993 359 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 FAM69BQ5VUD6 431 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 SPSB3Q6PJ21 355 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 SHISA6Q6ZSJ9 500 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 MAML2Q8IZL2 1156 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-204ENST00000424143 OSR2Q8N2R0 312 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 FAM24BQ8N5W8 94 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 OR14L1PQ8NHC6 308 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 IL22RA2Q969J5 263 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 HDHD3Q9BSH5 251 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-204ENST00000424143 FAM86C1Q9NVL1 165 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 TINAGQ9UJW2 476 aa13.21□□□□□ -0.29
C9orf3-204ENST00000424143 NOSIPQ9Y314 301 aaKnown RBP13.21□□□□□ -0.29
C9orf3-204ENST00000424143 CHCHD2Q9Y6H1 151 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-204ENST00000424143 CCDC187A0A096LP49 1063 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 B4DEV8 164 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 MPPED1O15442 326 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 SYNGR3O43761 229 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 HBE1P02100 147 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 TAF9Q16594 264 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 ZNF506Q5JVG8 444 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 PHYHD1Q5SRE7 291 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 DTX1Q86Y01 620 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 GPR137CQ8N3F9 429 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 NPRL2Q8WTW4 380 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 RBMXL1Q96E39 390 aaKnown RBP13.21□□□□□ -0.3
C9orf3-204ENST00000424143 DEFB126Q9BYW3 111 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 TMEM222Q9H0R3 208 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 GPR173Q9NS66 373 aa13.21□□□□□ -0.3
C9orf3-204ENST00000424143 LOC102723996A0A087X1L8 192 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 hCG_1809904A0A1W2PP81 198 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 FAM230AA0A1W2PPH8 454 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 A0A1W2PR64 198 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 A0A1W2PRV1 198 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 OR6C6A6NF89 314 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 NPIPA2E9PIF3 369 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 NPIPA3F8WFD2 350 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 F10P00742 488 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 SRP19P09132 144 aaKnown RBP13.2□□□□□ -0.3
C9orf3-204ENST00000424143 WNT2P09544 360 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 AKR1C3P42330 323 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 DSCR4P56555 118 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-204ENST00000424143 RAB2AP61019 212 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 HERV-K104P61576 105 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 FOXO1Q12778 655 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 MALLQ13021 153 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 OR8G1Q15617 311 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 ACSF3Q4G176 576 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-204ENST00000424143 ADAM5Q6NVV9 412 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 SLC35E3Q7Z769 313 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 ZIC4Q8N9L1 334 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 OR10AD1Q8NGE0 317 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 OR52M1Q8NGK5 317 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 DNASE2BQ8WZ79 361 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 TOMM40LQ969M1 308 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 BORCS8Q96FH0 119 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 REEP6Q96HR9 211 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 SPSB2Q99619 263 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 PAPOLGQ9BWT3 736 aaKnown RBP13.2□□□□□ -0.3
C9orf3-204ENST00000424143 TOLLIPQ9H0E2 274 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 LYRM2Q9NU23 88 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-204ENST00000424143 PLEK2Q9NYT0 353 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 DKKL1Q9UK85 242 aa13.2□□□□□ -0.3
C9orf3-204ENST00000424143 ZNF729A6NN14 1252 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-204ENST00000424143 GJE1A6NN92 205 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 DIRAS3O95661 229 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 NQO2P16083 231 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 FUT3P21217 361 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 NHLH2Q02577 135 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 SP6Q3SY56 376 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 FAM209BQ5JX69 171 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 WDR5BQ86VZ2 330 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 SLC25A45Q8N413 288 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 OR1F12Q8NHA8 337 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 FAM213BQ8TBF2 198 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 CD300LFQ8TDQ1 290 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 ISOC2Q96AB3 205 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 FBXO17Q96EF6 278 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 TPSD1Q9BZJ3 242 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 SH3BGRL3Q9H299 93 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 OPA3Q9H6K4 179 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 TREM2Q9NZC2 230 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 NXT1Q9UKK6 140 aaKnown RBP13.19□□□□□ -0.3
C9orf3-204ENST00000424143 FBXO7Q9Y3I1 522 aa13.19□□□□□ -0.3
C9orf3-204ENST00000424143 IGKV1-27A0A075B6S5 117 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 C3orf85A0A1B0GTC6 90 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 HSD17B6O14756 317 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 SLC25A6P12236 298 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 TCN2P20062 427 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 ATP6V0CP27449 155 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 OPRM1P35372 400 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 NKX2-1P43699 371 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms