RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 GRK1Q15835 563 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 TPTE2P1Q5T6R2 138 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 HEPN1Q6WQI6 88 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 EGFL6Q8IUX8 553 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 ZNF679Q8IYX0 411 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 OR14K1Q8NGZ2 314 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 CEP19Q96LK0 163 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 NOL4LQ96MY1 436 aaPredicted RBP13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 DUX3Q96PT4 197 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 NIPSNAP1Q9BPW8 284 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 HYDINQ4G0P3 5121 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 DHRS7CA6NNS2 312 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 OOSP1A8MZH6 123 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 MGST3O14880 152 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 PSPNO60542 156 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 IGHA1P01876 353 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 ECI1P42126 302 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 HLA-DRB5Q30154 266 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 ZNF829Q3KNS6 432 aaPredicted RBP13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 SLX4IPQ5VYV7 408 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 CCDC144NLQ6NUI1 221 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 CORO2AQ92828 525 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 RCHY1Q96PM5 261 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 CHST6Q9GZX3 395 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 CSMD3Q7Z407 3707 aa13.18□□□□□ -0.3
CHCHD3-202ENST00000423635 A0A1B0GTI1 187 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 PRR32B1ATL7 298 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 H3BN98 237 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 SRSF10O75494 262 aaKnown RBP13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 HAND1O96004 215 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 SLC2A5P22732 501 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 MNDAP41218 407 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 SLC35B1P78383 322 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 CPOQ8IVL8 374 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 ENTHD1Q8IYW4 607 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 OR5M8Q8NGP6 311 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 CDRT15Q96T59 188 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 MYLK2Q9H1R3 596 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 GAL3ST2Q9H3Q3 398 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 CCDC134Q9H6E4 229 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 DCLRE1BQ9H816 532 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 TAS2R3Q9NYW6 316 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 U3KQV3 271 aa13.17□□□□□ -0.3
CHCHD3-202ENST00000423635 A0A087X0M5 115 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 A0A1B0GX30 115 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 A6NIN4 97 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 SERPINE3A8MV23 424 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 IGHG2P01859 326 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 GABRR1P24046 479 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 CDK2P24941 298 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 RIDAP52758 137 aaKnown RBP13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 PRRX1P54821 245 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 P2RX3P56373 397 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 RAB25P57735 213 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 ESRRGP62508 458 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 ZNF91Q05481 1191 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 MFGE8Q08431 387 aaPredicted RBP13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 KIR2DS1Q14954 304 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 PRAMEF5Q5TYX0 476 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 TRAPPC6BQ86SZ2 158 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 SBSPONQ8IVN8 264 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 ELMOD2Q8IZ81 293 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 C5orf56Q8N8D9 126 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 ASB17Q8WXJ9 295 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 SLAMF9Q96A28 289 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 CADM1Q9BY67 442 aaKnown RBP13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 REEP1Q9H902 201 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 ZNF286AQ9HBT8 521 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 SLC7A11Q9UPY5 501 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 ZNF256Q9Y2P7 627 aaPredicted RBP13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 SAMHD1Q9Y3Z3 626 aaKnown RBP13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 SMAD5-AS1Q9Y6J3 95 aa13.16□□□□□ -0.3
CHCHD3-202ENST00000423635 IGKV1-27A0A075B6S5 117 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 FAM230AA0A1W2PPH8 454 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 TOR1AO14656 332 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 FGF16O43320 207 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 HMGN1P05114 100 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 CBX1P83916 185 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 GINS1Q14691 196 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 ZNF146Q15072 292 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 OR2T5Q6IEZ7 315 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 TEX38Q6PEX7 206 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 PGAM4Q8N0Y7 254 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 BBS1Q8NFJ9 593 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 OR10G2Q8NGC3 310 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 OR2T29Q8NH02 315 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 OR8U1Q8NH10 309 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 TRMT10AQ8TBZ6 339 aaKnown RBP13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 FEVQ99581 238 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 MOB1AQ9H8S9 216 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 GLS2Q9UI32 602 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 LINC00527Q9UJ94 153 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 TMEM14AQ9Y6G1 99 aa13.15□□□□□ -0.3
CHCHD3-202ENST00000423635 TRGV10A0A0A0MS01 117 aa13.14□□□□□ -0.31
CHCHD3-202ENST00000423635 SEC14L6B5MCN3 397 aa13.14□□□□□ -0.31
CHCHD3-202ENST00000423635 GDNFP39905 211 aa13.14□□□□□ -0.31
CHCHD3-202ENST00000423635 OR3A1P47881 315 aa13.14□□□□□ -0.31
CHCHD3-202ENST00000423635 CDX1P47902 265 aaPredicted RBP13.14□□□□□ -0.31
CHCHD3-202ENST00000423635 FUT6P51993 359 aa13.14□□□□□ -0.31
CHCHD3-202ENST00000423635 RPS7P62081 194 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms