RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 EXT1Q16394 746 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 CEACAM16Q2WEN9 425 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 OSR2Q8N2R0 312 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 HSD17B11Q8NBQ5 300 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 AGBL5Q8NDL9 886 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 CACFD1Q9UGQ2 172 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 URB1O60287 2271 aaKnown RBP13.68□□□□□ -0.22
CDH1-202ENST00000422392 PATE3B3GLJ2 98 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 PHF1O43189 567 aaPredicted RBP13.67□□□□□ -0.22
CDH1-202ENST00000422392 NPBWR2P48146 333 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 HOXA1P49639 335 aaPredicted RBP13.67□□□□□ -0.22
CDH1-202ENST00000422392 CARD18P57730 90 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 RAC3P60763 192 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 FAM3AP98173 230 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 MSI2Q96DH6 328 aaKnown RBP13.67□□□□□ -0.22
CDH1-202ENST00000422392 C14orf79Q96F83 325 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 RPS10P5Q9NQ39 176 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 AHCTF1Q8WYP5 2266 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 ZNF716A6NP11 495 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 E5RGE8 158 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 TRAPPC6AO75865 159 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 DAOP14920 347 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 IGSF11Q5DX21 431 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 PLCXD3Q63HM9 321 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 SLC23A3Q6PIS1 610 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 FBXW12Q6X9E4 464 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 LHFPL2Q6ZUX7 228 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 AAED1Q7RTV5 226 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 GGNQ86UU5 652 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 CLDN23Q96B33 292 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 TP53RKQ96S44 253 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 PLEKHA2Q9HB19 425 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 BIN3Q9NQY0 253 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 NSG2Q9Y328 171 aa13.67□□□□□ -0.22
CDH1-202ENST00000422392 OR6C6A6NF89 314 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 TERTO14746 1132 aaKnown RBP13.66□□□□□ -0.22
CDH1-202ENST00000422392 OR7C1O76099 320 aaPredicted RBP13.66□□□□□ -0.22
CDH1-202ENST00000422392 HEXAP06865 529 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 CST2P09228 141 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 DTYMKP23919 212 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 MLF1P58340 268 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 IL11RAQ14626 422 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 WIPI1Q5MNZ9 446 aaPredicted RBP13.66□□□□□ -0.22
CDH1-202ENST00000422392 LIAT1Q6ZQX7 453 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 SUMF1Q8NBK3 374 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 ISOC2Q96AB3 205 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 INTS12Q96CB8 462 aaKnown RBP13.66□□□□□ -0.22
CDH1-202ENST00000422392 IP6K3Q96PC2 410 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 FOXB1Q99853 325 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 WNT5BQ9H1J7 359 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 FAM212BQ9NTI7 297 aaPredicted RBP13.66□□□□□ -0.22
CDH1-202ENST00000422392 SIT1Q9Y3P8 196 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 C9J4A7 227 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 SNRNP70P08621 437 aaKnown RBP13.66□□□□□ -0.22
CDH1-202ENST00000422392 SPINK2P20155 84 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 AADACP22760 399 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 SNCAP37840 140 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 DAZAP2Q15038 168 aaPredicted RBP13.66□□□□□ -0.22
CDH1-202ENST00000422392 SKA3Q8IX90 412 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 SLC35G3Q8N808 338 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 LYPD6BQ8NI32 183 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 M1APQ8TC57 530 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 ABHD3Q8WU67 409 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 GALNT14Q96FL9 552 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 ZNF845Q96IR2 970 aaPredicted RBP13.66□□□□□ -0.22
CDH1-202ENST00000422392 C18orf12Q96KH6 178 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 EIF5A2Q9GZV4 153 aaKnown RBP13.66□□□□□ -0.22
CDH1-202ENST00000422392 ZNF442Q9H7R0 627 aa13.66□□□□□ -0.22
CDH1-202ENST00000422392 RCL1Q9Y2P8 373 aaKnown RBP13.66□□□□□ -0.22
CDH1-202ENST00000422392 hCG_38984A0A1B0GV85 526 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 ESPL1Q14674 2120 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 C9orf135Q5VTT2 229 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 OR2Y1Q8NGV0 311 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 NAT6Q93015 286 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 OR2H1Q9GZK4 316 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 BCO1Q9HAY6 547 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 ZNF286AQ9HBT8 521 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 COA4Q9NYJ1 87 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 PRH1P02810 166 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 EDN3P14138 238 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 CAMLGP49069 296 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 CLDN15P56746 228 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 GUK1Q16774 197 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 TMEM42Q69YG0 159 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 OR10D3Q8NH80 312 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 PILRBQ9UKJ0 227 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 STARD10Q9Y365 291 aa13.65□□□□□ -0.22
CDH1-202ENST00000422392 TNRC6BQ9UPQ9 1833 aaKnown RBP13.64□□□□□ -0.23
CDH1-202ENST00000422392 H7C1Q1 480 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 SLC33A1O00400 549 aaPredicted RBP13.64□□□□□ -0.23
CDH1-202ENST00000422392 DANCRP0C864 163 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 TCN2P20062 427 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 HABP2Q14520 560 aaPredicted RBP13.64□□□□□ -0.23
CDH1-202ENST00000422392 AWAT1Q58HT5 328 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 ASCL4Q6XD76 172 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 SLC25A26Q70HW3 274 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 ZNF611Q8N823 705 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 MOB3AQ96BX8 217 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 SF3B5Q9BWJ5 86 aaKnown RBP13.64□□□□□ -0.23
CDH1-202ENST00000422392 SCRT1Q9BWW7 348 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms