RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 ZNF724A8MTY0 619 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 OGG1O15527 345 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 RAB11AP62491 216 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 GUCA2AQ02747 115 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 LINC01590Q5TEZ4 76 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 LRRTM1Q86UE6 522 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 OR1K1Q8NGR3 316 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 ZNRF4Q8WWF5 429 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 FYTTD1Q96QD9 318 aaKnown RBP8.48□□□□□ -1.05
CMSS1-201ENST00000421999 GAL3ST2Q9H3Q3 398 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 KLK11Q9UBX7 282 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 OR5V1Q9UGF6 321 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 HEATR5AQ86XA9 2040 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 CEP295Q9C0D2 2601 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 J3QT63 122 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 GMDSO60547 372 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 NPIPB7O75200 414 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 TPPPO94811 219 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 ANXA7P20073 488 aaKnown RBP8.48□□□□□ -1.05
CMSS1-201ENST00000421999 CALCRP30988 508 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 ECI1P42126 302 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 NKX2-5P52952 324 aaPredicted RBP8.48□□□□□ -1.05
CMSS1-201ENST00000421999 SORDQ00796 357 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 Q6ZT83 130 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 RBMXL3Q8N7X1 1067 aaKnown RBP8.48□□□□□ -1.05
CMSS1-201ENST00000421999 OR4S1Q8NGB4 309 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 PINX1Q96BK5 328 aaKnown RBP8.48□□□□□ -1.05
CMSS1-201ENST00000421999 HYLS1Q96M11 299 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 SLIRPQ9GZT3 109 aaKnown RBP8.48□□□□□ -1.05
CMSS1-201ENST00000421999 METTL17Q9H7H0 456 aaPredicted RBP8.48□□□□□ -1.05
CMSS1-201ENST00000421999 PSG11Q9UQ72 335 aa8.48□□□□□ -1.05
CMSS1-201ENST00000421999 MUC22E2RYF6 1773 aaPredicted RBP8.47□□□□□ -1.05
CMSS1-201ENST00000421999 FAM157AC9JC47 383 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 K7EPK0 472 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 TSPAN4O14817 238 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 SSX5O60225 188 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 ZG16O60844 167 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 HPNP05981 417 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 CBR1P16152 277 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 EVX1P49640 407 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 AVPI1Q5T686 147 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 OR8G2PQ6IF36 304 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 SLC25A47Q6Q0C1 308 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 ZNF546Q86UE3 836 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 FAM71E2Q8N5Q1 922 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 SEC22CQ9BRL7 303 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 AUNIPQ9H7T9 357 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 ASCL3Q9NQ33 180 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 DLL4Q9NR61 685 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 ZNF230Q9UIE0 474 aaPredicted RBP8.47□□□□□ -1.05
CMSS1-201ENST00000421999 PCDHGA9Q9Y5G4 932 aaKnown RBP8.47□□□□□ -1.05
CMSS1-201ENST00000421999 PPIAL4EA0A075B759 164 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 IGHV3OR15-7A0A075B7D8 119 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 PPIAL4DF5H284 164 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 FBXO24O75426 580 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 PPIAL4FP0DN26 164 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 DCTDP32321 178 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 SERPINF1P36955 418 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 PTGDSP41222 190 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 STUMQ69YW2 141 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 MARCH1Q8TCQ1 289 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 OR2V2Q96R30 315 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 PCGF1Q9BSM1 259 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 PPIL3Q9H2H8 161 aaKnown RBP8.47□□□□□ -1.05
CMSS1-201ENST00000421999 TAS2R3Q9NYW6 316 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 OR6C3Q9NZP0 311 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 FOXD3Q9UJU5 478 aaPredicted RBP8.47□□□□□ -1.05
CMSS1-201ENST00000421999 PPIAL4AQ9Y536 164 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 IGLV3-32A0A0A0MS00 114 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 IGKV1D-43A0A0B4J1Z2 117 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 MED6O75586 246 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 IFNA1P01562 189 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 ZBTB25P24278 435 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 CLINT1Q14677 625 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 SLC25A53Q5H9E4 307 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 ATPAF1Q5TC12 328 aaPredicted RBP8.47□□□□□ -1.05
CMSS1-201ENST00000421999 FAHD2BQ6P2I3 314 aaPredicted RBP8.47□□□□□ -1.05
CMSS1-201ENST00000421999 GLCCI1Q86VQ1 547 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 SPICQ8N5J4 248 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 RTN4IP1Q8WWV3 396 aaPredicted RBP8.47□□□□□ -1.05
CMSS1-201ENST00000421999 FAHD2AQ96GK7 314 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 MED30Q96HR3 178 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 TMEM246Q9BRR3 403 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 NMNAT2Q9BZQ4 307 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 CYB5R1Q9UHQ9 305 aa8.47□□□□□ -1.05
CMSS1-201ENST00000421999 RFPL4AA6NLU0 287 aa8.46□□□□□ -1.05
CMSS1-201ENST00000421999 RFPL4AL1F8VTS6 287 aa8.46□□□□□ -1.05
CMSS1-201ENST00000421999 SSX4O60224 188 aa8.46□□□□□ -1.05
CMSS1-201ENST00000421999 CEACAM6P40199 344 aa8.46□□□□□ -1.05
CMSS1-201ENST00000421999 ASCL1P50553 236 aa8.46□□□□□ -1.05
CMSS1-201ENST00000421999 ACSF3Q4G176 576 aaPredicted RBP8.46□□□□□ -1.05
CMSS1-201ENST00000421999 ZNF626Q68DY1 528 aa8.46□□□□□ -1.05
CMSS1-201ENST00000421999 S100A7AQ86SG5 101 aa8.46□□□□□ -1.05
CMSS1-201ENST00000421999 MUC15Q8N387 334 aa8.46□□□□□ -1.05
CMSS1-201ENST00000421999 OR5A2Q8NGI9 324 aa8.46□□□□□ -1.05
CMSS1-201ENST00000421999 ITLN1Q8WWA0 313 aa8.46□□□□□ -1.05
CMSS1-201ENST00000421999 ITPKCQ96DU7 683 aa8.46□□□□□ -1.05
CMSS1-201ENST00000421999 FER1L5A0AVI2 2057 aa8.46□□□□□ -1.05
CMSS1-201ENST00000421999 TRAV39A0A0B4J263 110 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 CCSO14618 274 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms