RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 IGFBP7Q16270 282 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 VASH2Q86V25 355 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 PTP4A1Q93096 173 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 DOK5Q9P104 306 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 ERVH48-1M5A8F1 160 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 SOCS1O15524 211 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 KCNAB3O43448 404 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 SEMA7AO75326 666 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.97□□□□□ -0.65
CLCN4-203ENST00000421085 ANGPTL4Q9BY76 406 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 OR2D2Q9H210 308 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 UBE2ZQ9H832 354 aaPredicted RBP10.97□□□□□ -0.65
CLCN4-203ENST00000421085 METTL12A8MUP2 240 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 CTLA4P16410 223 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 VEGFBP49765 207 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 SUCLG1P53597 346 aaKnown RBP10.97□□□□□ -0.65
CLCN4-203ENST00000421085 DSCR4P56555 118 aaPredicted RBP10.97□□□□□ -0.65
CLCN4-203ENST00000421085 ZADH2Q8N4Q0 377 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 ELSPBP1Q96BH3 223 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 MAP1LC3CQ9BXW4 147 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 PROCRQ9UNN8 238 aa10.97□□□□□ -0.65
CLCN4-203ENST00000421085 IGLV3-16A0A075B6K0 115 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 ALG1L2C9J202 215 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 GNG10P50151 68 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 Q8IYB0 196 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 MRPL24Q96A35 216 aaKnown RBP10.96□□□□□ -0.65
CLCN4-203ENST00000421085 TMEM56Q96MV1 263 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 MOGAT1Q96PD6 335 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 TM4SF4P48230 202 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 LYRM7Q5U5X0 104 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 RFESDQ8TAC1 157 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 A0A1W2PR80 420 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 ST8SIA5O15466 376 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 BCL3P20749 454 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 RPS4Y1P22090 263 aaKnown RBP10.96□□□□□ -0.65
CLCN4-203ENST00000421085 OR10AC1Q8NH08 325 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 WDR13Q9H1Z4 485 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 SH2D2AQ9NP31 389 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 TNFSF18Q9UNG2 199 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 KLF13Q9Y2Y9 288 aaPredicted RBP10.96□□□□□ -0.65
CLCN4-203ENST00000421085 WASHC3Q9Y3C0 194 aa10.96□□□□□ -0.65
CLCN4-203ENST00000421085 METAP1P53582 386 aa10.96□□□□□ -0.66
CLCN4-203ENST00000421085 ZNF345Q14585 488 aa10.96□□□□□ -0.66
CLCN4-203ENST00000421085 SURF2Q15527 256 aaPredicted RBP10.96□□□□□ -0.66
CLCN4-203ENST00000421085 ZNF774Q6NX45 483 aa10.96□□□□□ -0.66
CLCN4-203ENST00000421085 OR4F17Q8NGA8 305 aa10.96□□□□□ -0.66
CLCN4-203ENST00000421085 TBX15Q96SF7 602 aa10.96□□□□□ -0.66
CLCN4-203ENST00000421085 TJP1Q07157 1748 aa10.96□□□□□ -0.66
CLCN4-203ENST00000421085 FGF2P09038 288 aa10.96□□□□□ -0.66
CLCN4-203ENST00000421085 MYOGP15173 224 aa10.96□□□□□ -0.66
CLCN4-203ENST00000421085 EWSR1Q01844 656 aaKnown RBP eCLIP10.96□□□□□ -0.66
CLCN4-203ENST00000421085 FNDC7Q5VTL7 733 aa10.96□□□□□ -0.66
CLCN4-203ENST00000421085 TMEM91Q6ZNR0 172 aa10.96□□□□□ -0.66
CLCN4-203ENST00000421085 TMEM251Q8N6I4 163 aa10.96□□□□□ -0.66
CLCN4-203ENST00000421085 SPACA9Q96E40 222 aaPredicted RBP10.96□□□□□ -0.66
CLCN4-203ENST00000421085 ANXA10Q9UJ72 324 aa10.96□□□□□ -0.66
CLCN4-203ENST00000421085 ACAA2P42765 397 aaKnown RBP10.95□□□□□ -0.66
CLCN4-203ENST00000421085 LBX1P52954 281 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 TRAT1Q6PIZ9 186 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 CD99P14209 185 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 CA6P23280 308 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 RAB24Q969Q5 203 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 ZNF707Q96C28 371 aaPredicted RBP10.95□□□□□ -0.66
CLCN4-203ENST00000421085 CACNA1CQ13936 2221 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 ANKRD36CQ5JPF3 1778 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 PLPP3O14495 311 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 SYNGR2O43760 224 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 RCC1P18754 421 aaPredicted RBP10.95□□□□□ -0.66
CLCN4-203ENST00000421085 VMA21Q3ZAQ7 101 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 OR2M5A3KFT3 312 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 FAM74A7A6NL05 159 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 NCBP2LA6PVI3 153 aaKnown RBP10.95□□□□□ -0.66
CLCN4-203ENST00000421085 PRSS1P07477 247 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 SP1P08047 785 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 CCR2P41597 374 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 GAMTQ14353 236 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 FAM74A3Q4VXF1 159 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 MRPL54Q6P161 138 aaKnown RBP10.95□□□□□ -0.66
CLCN4-203ENST00000421085 MOB3BQ86TA1 216 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 RHOVQ96L33 236 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 MRGPRX1Q96LB2 322 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 IGHV3-43A0A0B4J1X8 118 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 C7orf66A4D0T2 115 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 IGHV3-43DP0DP04 118 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 RPL7P18124 248 aaKnown RBP10.95□□□□□ -0.66
CLCN4-203ENST00000421085 PRSS41Q7RTY9 318 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 WDR34Q96EX3 536 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 SLC7A10Q9NS82 523 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 MMP17Q9ULZ9 603 aa10.95□□□□□ -0.66
CLCN4-203ENST00000421085 TMIGD3P0DMS9 266 aaPredicted RBP10.94□□□□□ -0.66
CLCN4-203ENST00000421085 MUC1P15941 1255 aaPredicted RBP10.94□□□□□ -0.66
CLCN4-203ENST00000421085 COL5A1-AS1Q5SY13 56 aa10.94□□□□□ -0.66
CLCN4-203ENST00000421085 C10orf111Q8N326 155 aa10.94□□□□□ -0.66
CLCN4-203ENST00000421085 ZNF391Q9UJN7 358 aa10.94□□□□□ -0.66
CLCN4-203ENST00000421085 STARD10Q9Y365 291 aa10.94□□□□□ -0.66
CLCN4-203ENST00000421085 DDX60LQ5H9U9 1706 aaKnown RBP10.94□□□□□ -0.66
CLCN4-203ENST00000421085 A6NDN8 102 aa10.94□□□□□ -0.66
CLCN4-203ENST00000421085 SLC22A20A6NK97 555 aa10.94□□□□□ -0.66
CLCN4-203ENST00000421085 NMBP08949 121 aa10.94□□□□□ -0.66
CLCN4-203ENST00000421085 IER3P46695 156 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms