RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SLC25A1P53007 311 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 RAC3P60763 192 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 PTOV1Q86YD1 416 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 CARFQ8N187 725 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 OR2M3Q8NG83 312 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 OR4A4PQ8NGN8 299 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 MBD1Q9UIS9 605 aaPredicted RBP9.96□□□□□ -0.81
PTCH1-205ENST00000418258 YLPM1P49750 1951 aaKnown RBP9.96□□□□□ -0.82
PTCH1-205ENST00000418258 TRBV23-1A0A0A0MS06 115 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 SNRPGP15A8MWD9 76 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 RPL30P62888 115 aaKnown RBP9.96□□□□□ -0.82
PTCH1-205ENST00000418258 WDR38Q5JTN6 314 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 FAM109BQ6ICB4 259 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-205ENST00000418258 RHBDD2Q6NTF9 364 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 WFDC3Q8IUB2 231 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 ZNF683Q8IZ20 524 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 DNAJB12Q9NXW2 375 aaKnown RBP9.96□□□□□ -0.82
PTCH1-205ENST00000418258 KCNE1BA0A087WTH5 132 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 NEURL1O76050 574 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 ADRB1P08588 477 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 MOGAT3Q86VF5 341 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 LINC01555Q8NAE3 123 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 ABHD14AQ9BUJ0 271 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 TNFRSF12AQ9NP84 129 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 FGF20Q9NP95 211 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-205ENST00000418258 AUP1Q9Y679 476 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 OR5B21A6NL26 309 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 SPINK2P20155 84 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 MMP15P51511 669 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 SLC37A1P57057 533 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 TMPRSS3P57727 454 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 C21orf58P58505 322 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 MED30Q96HR3 178 aa9.96□□□□□ -0.82
PTCH1-205ENST00000418258 NKX2-2O95096 273 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 C1QBP02746 253 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 UCNP55089 124 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 RAE1P78406 368 aaKnown RBP9.95□□□□□ -0.82
PTCH1-205ENST00000418258 SCN4AP35499 1836 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 A0A1B0GUH1 482 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 ORM1P02763 201 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 NOL4LQ96MY1 436 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-205ENST00000418258 ZNF629Q9UEG4 869 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-205ENST00000418258 DLEC1Q9Y238 1755 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 C3orf85A0A1B0GTC6 90 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 OOEPA6NGQ2 149 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 PGA3P0DJD8 388 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 OR3A1P47881 315 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 BAK1Q16611 211 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 FDX2Q6P4F2 183 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 WDR89Q96FK6 387 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-205ENST00000418258 TRAPPC4Q9Y296 219 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 TRAPPC1Q9Y5R8 145 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 ZDBF2Q9HCK1 2354 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 USF1P22415 310 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-205ENST00000418258 TGFBR1P36897 503 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 SLC38A11Q08AI6 406 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 FAHD2BQ6P2I3 314 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-205ENST00000418258 OR4S2Q8NH73 311 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 PIK3IP1Q96FE7 263 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 FAHD2AQ96GK7 314 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 RHOFQ9HBH0 211 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 CXorf51AA0A1B0GTR3 108 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 HYAL3O43820 417 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-205ENST00000418258 AREGP15514 252 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 NHLH1Q02575 133 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 NHLH2Q02577 135 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 CACNG5Q9UF02 275 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 SIGLEC7Q9Y286 467 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 RBBP6Q7Z6E9 1792 aaKnown RBP9.95□□□□□ -0.82
PTCH1-205ENST00000418258 HSBP1O75506 76 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 ETV3LQ6ZN32 361 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 AMER3Q8N944 861 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 RASL10BQ96S79 203 aa9.95□□□□□ -0.82
PTCH1-205ENST00000418258 PMCHP20382 165 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 FPR2P25090 351 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 PDPNQ86YL7 162 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 GABRG3Q99928 467 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 SH2D2AQ9NP31 389 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 TMED3Q9Y3Q3 217 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 QSER1Q2KHR3 1735 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 PATE3B3GLJ2 98 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 PRSS12P56730 875 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 ECSCRQ19T08 205 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 RNASEKQ6P5S7 137 aaKnown RBP9.94□□□□□ -0.82
PTCH1-205ENST00000418258 OR2W3Q7Z3T1 314 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 PRSS3P2Q8NHM4 247 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 TMEM18Q96B42 140 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 CACNA1DQ01668 2161 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 C16orf97H3BN30 126 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 PYCARD-AS1I3L0S3 204 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 SPNS2Q8IVW8 549 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 SLC45A2Q9UMX9 530 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 MPZL1O95297 269 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 MYPOPQ86VE0 399 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-205ENST00000418258 ARRDC1Q8N5I2 433 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 GPR137Q96N19 417 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 TSPAN32Q96QS1 320 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 NTMQ9P121 344 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 IGHV3OR15-7A0A075B7D8 119 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 TCRBV5S2A0A599 114 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms