RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 MT-ND2P03891 347 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 TK1P04183 234 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 CDK1P06493 297 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 EEF1B2P24534 225 aaKnown RBP9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 HILS1P60008 231 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 ERVK11-1P61568 191 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 RPL31P62899 125 aaKnown RBP9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 SLC35A2P78381 396 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 RSU1Q15404 277 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 MED22Q15528 200 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 RBM48Q5RL73 367 aaKnown RBP9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 NANOGP1Q8N7R0 232 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 OR51A2Q8NGJ7 313 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 TNFAIP8L1Q8WVP5 186 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 RGP1Q92546 391 aaPredicted RBP9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 NR1H4Q96RI1 486 aaPredicted RBP9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 TBX15Q96SF7 602 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 TNFRSF19Q9NS68 423 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 FKBP14Q9NWM8 211 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 IL36RNQ9UBH0 155 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 FAM96BQ9Y3D0 163 aa9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 SOX21Q9Y651 276 aaPredicted RBP9.12□□□□□ -0.95
TM9SF4-203ENST00000417389 CENPVL3A0A0U1RRI6 287 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 hCG_1809904A0A1W2PP81 198 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 A0A1W2PPE2 198 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 A0A1W2PR64 198 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 A0A1W2PRV1 198 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 MEX3AA1L020 520 aaKnown RBP9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 SH2D1BO14796 132 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 RGS10O43665 173 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 HSMCR30P0CW71 290 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 ZNF44P15621 663 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 CRHBPP24387 322 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 GABARAPL2P60520 117 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 GRK1Q15835 563 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 Q499Y3 187 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 YIF1BQ5BJH7 314 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 DDI2Q5TDH0 399 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 DMKNQ6E0U4 476 aaPredicted RBP9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 USP43Q70EL4 1123 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 RNF144BQ7Z419 303 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 PHC2Q8IXK0 858 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 KIR3DL3Q8N743 410 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 LY6G5BQ8NDX9 201 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 OR52N4Q8NGI2 321 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 PPP1R35Q8TAP8 253 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 TBC1D15Q8TC07 691 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 ORAI1Q96D31 301 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 OR14A2Q96R54 314 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 NKX3-1Q99801 234 aaPredicted RBP9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 CHST6Q9GZX3 395 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 FAM234AQ9H0X4 552 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 SIRPDQ9H106 197 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 EXOSC4Q9NPD3 245 aaKnown RBP9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 TMEM138Q9NPI0 162 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 C19orf12Q9NSK7 152 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 PAK1IP1Q9NWT1 392 aaPredicted RBP9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 ING3Q9NXR8 418 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 ING4Q9UNL4 249 aa9.11□□□□□ -0.95
TM9SF4-203ENST00000417389 IGHV1-69DA0A0B4J2H0 117 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 MDFIC2A0A1B0GVS7 189 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 M0R1W7 72 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 HTR3BO95264 441 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 PAHP00439 452 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 IGHV1-69P01742 117 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 MMP9P14780 707 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 BDKRB2P30411 391 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 ZNF93P35789 620 aaPredicted RBP9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 DLX1P56177 255 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 BPIFB3P59826 476 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 GUCA2AQ02747 115 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 KLRD1Q13241 179 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 SPHARQ15513 63 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 DEFB112Q30KQ8 113 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 SPIN3Q5JUX0 258 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 TRAPPC6BQ86SZ2 158 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 JAGN1Q8N5M9 183 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 OR5D13Q8NGL4 314 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 OR10K1Q8NGX5 313 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 C8orf46Q8TAG6 207 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 SGCDQ92629 289 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 SNX22Q96L94 193 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 TMED9Q9BVK6 235 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 DUSP21Q9H596 190 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 METTL8Q9H825 291 aaKnown RBP9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 HMG20AQ9NP66 347 aa9.1□□□□□ -0.95
TM9SF4-203ENST00000417389 IGKV1-12A0A0C4DH73 117 aa9.09□□□□□ -0.95
TM9SF4-203ENST00000417389 DNAJC9-AS1A6NH13 148 aa9.09□□□□□ -0.95
TM9SF4-203ENST00000417389 K7N7A8 449 aa9.09□□□□□ -0.95
TM9SF4-203ENST00000417389 GABRPO00591 440 aa9.09□□□□□ -0.95
TM9SF4-203ENST00000417389 HSPB6O14558 160 aa9.09□□□□□ -0.95
TM9SF4-203ENST00000417389 DEGS1O15121 323 aa9.09□□□□□ -0.95
TM9SF4-203ENST00000417389 KDM4BO94953 1096 aa9.09□□□□□ -0.95
TM9SF4-203ENST00000417389 ALX3O95076 343 aa9.09□□□□□ -0.95
TM9SF4-203ENST00000417389 CDRT1O95170 752 aa9.09□□□□□ -0.95
TM9SF4-203ENST00000417389 IGKV1D-12P01611 117 aa9.09□□□□□ -0.95
TM9SF4-203ENST00000417389 CSTBP04080 98 aaKnown RBP9.09□□□□□ -0.95
TM9SF4-203ENST00000417389 MAS1P04201 325 aa9.09□□□□□ -0.95
TM9SF4-203ENST00000417389 COX7A1P24310 79 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms