RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 LIMS4P0CW20 117 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 PRKACAP17612 351 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 EDDM3BP56851 147 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 RELBQ01201 579 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 TAF9Q16594 264 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 MIDNQ504T8 468 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 SERPINA12Q8IW75 414 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 OR8H2Q8N162 312 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 PACRGLQ8N7B6 248 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 SPACA5Q96QH8 159 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 BEX1Q9HBH7 125 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 DHDHQ9UQ10 334 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 TENM1Q9UKZ4 2725 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 TMEM82A0PJX8 343 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 IRGMA1A4Y4 181 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 CALCBP10092 127 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 DCKP27707 260 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 PEX2P28328 305 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 DUSP1P28562 367 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 ETV1P50549 477 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 GTF2A1P52655 376 aaPredicted RBP12.74□□□□□ -0.37
ITGB1-204ENST00000417122 SNU13P55769 128 aaKnown RBP12.74□□□□□ -0.37
ITGB1-204ENST00000417122 ERVFRD-1P60508 538 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 ZNF146Q15072 292 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 GDPGP1Q6ZNW5 385 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 C17orf107Q6ZR85 190 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 RNF144BQ7Z419 303 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 PARP16Q8N5Y8 322 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 BEND2Q8NDZ0 799 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 SETD9Q8NE22 299 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 OR5D18Q8NGL1 313 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 OR5D14Q8NGL3 314 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 TSEN15Q8WW01 171 aaKnown RBP12.74□□□□□ -0.37
ITGB1-204ENST00000417122 SLITRK2Q9H156 845 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 GLS2Q9UI32 602 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 VPREB3Q9UKI3 123 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 DSCAML1Q8TD84 2053 aa12.74□□□□□ -0.37
ITGB1-204ENST00000417122 IGKV1-12A0A0C4DH73 117 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 C17orf98A8MV24 154 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 SULT1B1O43704 296 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 KDM4BO94953 1096 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 ALX3O95076 343 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 IGKV1D-12P01611 117 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 HCKP08631 526 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 GABRR1P24046 479 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 COX7A1P24310 79 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 DLX6P56179 175 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 ADARB1P78563 741 aaKnown RBP12.73□□□□□ -0.37
ITGB1-204ENST00000417122 EDDM3AQ14507 147 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 GRK1Q15835 563 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 CCDC58Q4VC31 144 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 SPIN3Q5JUX0 258 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 CRIP3Q6Q6R5 217 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 TMPRSS11AQ6ZMR5 421 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 ZNF782Q6ZMW2 699 aaPredicted RBP12.73□□□□□ -0.37
ITGB1-204ENST00000417122 DHRSXQ8N5I4 330 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 ZSCAN4Q8NAM6 433 aaPredicted RBP12.73□□□□□ -0.37
ITGB1-204ENST00000417122 OR52N4Q8NGI2 321 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 OR5R1Q8NH85 324 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 C17orf50Q8WW18 174 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 CHST6Q9GZX3 395 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 HMG20AQ9NP66 347 aa12.73□□□□□ -0.37
ITGB1-204ENST00000417122 MEX3AA1L020 520 aaKnown RBP12.72□□□□□ -0.37
ITGB1-204ENST00000417122 CLPSL1A2RUU4 121 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 PSPNO60542 156 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 ZNF728P0DKX0 622 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 BMXP51813 675 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 MEF2CQ06413 473 aaPredicted RBP12.72□□□□□ -0.37
ITGB1-204ENST00000417122 IL18R1Q13478 541 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 KISS1Q15726 138 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 OR2G6Q5TZ20 316 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 OLFML2AQ68BL7 652 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 XAF1Q6GPH4 301 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 RPL22L1Q6P5R6 122 aaKnown RBP12.72□□□□□ -0.37
ITGB1-204ENST00000417122 SAXO1Q8IYX7 474 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 PPP1R35Q8TAP8 253 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 AJUBAQ96IF1 538 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 RHOFQ9HBH0 211 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 EXOSC4Q9NPD3 245 aaKnown RBP12.72□□□□□ -0.37
ITGB1-204ENST00000417122 DIMT1Q9UNQ2 313 aaKnown RBP12.72□□□□□ -0.37
ITGB1-204ENST00000417122 GSTK1Q9Y2Q3 226 aa12.72□□□□□ -0.37
ITGB1-204ENST00000417122 hADV38S2A0JD32 116 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 SIRPB1O00241 398 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 SH2D1BO14796 132 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 RBP4P02753 201 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 MYL12AP19105 171 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 SOX2P48431 317 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 LGALS4P56470 323 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 CDK5R1Q15078 307 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 OGFRL1Q5TC84 451 aaPredicted RBP12.71□□□□□ -0.37
ITGB1-204ENST00000417122 DHRS7BQ6IAN0 325 aaPredicted RBP12.71□□□□□ -0.37
ITGB1-204ENST00000417122 TCF23Q7RTU1 214 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 TPRX1Q8N7U7 411 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 OR4S1Q8NGB4 309 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 GPR148Q8TDV2 347 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 RGP1Q92546 391 aaPredicted RBP12.71□□□□□ -0.37
ITGB1-204ENST00000417122 TMEM80Q96HE8 168 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 ZNF714Q96N38 554 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 SSX3Q99909 188 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 MEGF9Q9H1U4 602 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms