RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CLDN34H7C241 214 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 CTDSPLO15194 276 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 ADAM20O43506 726 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 EIF3GO75821 320 aaKnown RBP eCLIP11.44□□□□□ -0.58
SCN1B-202ENST00000415950 RECKO95980 971 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 HIST1H1DP16402 221 aaKnown RBP11.44□□□□□ -0.58
SCN1B-202ENST00000415950 FUT3P21217 361 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 NOVA1P51513 510 aaKnown RBP11.44□□□□□ -0.58
SCN1B-202ENST00000415950 SPINK9Q5DT21 86 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 OR6S1Q8NH40 331 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 VN1R1Q9GZP7 353 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 MMP17Q9ULZ9 603 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 C21orf62-AS1Q17RA5 79 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 NHLRC3Q5JS37 347 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 FAM109BQ6ICB4 259 aaPredicted RBP11.44□□□□□ -0.58
SCN1B-202ENST00000415950 OR10V1Q8NGI7 309 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 POM121Q96HA1 1249 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 SLC35B3Q9H1N7 401 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 COL11A2P13942 1736 aaPredicted RBP11.44□□□□□ -0.58
SCN1B-202ENST00000415950 COL9A1P20849 921 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 PTTG1IPP53801 180 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 ALKBH6Q3KRA9 238 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 UQCC3Q6UW78 93 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 TMEM178AQ8NBL3 297 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 FAM210BQ96KR6 192 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 VAMP8Q9BV40 100 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 BARX1Q9HBU1 254 aaPredicted RBP11.43□□□□□ -0.58
SCN1B-202ENST00000415950 TRAPPC1Q9Y5R8 145 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 CACNA1BQ00975 2339 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 TCAPO15273 167 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 MOSPD3O75425 235 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 PTBP3O95758 552 aaKnown RBP11.43□□□□□ -0.58
SCN1B-202ENST00000415950 MMP7P09237 267 aaPredicted RBP11.43□□□□□ -0.58
SCN1B-202ENST00000415950 POLR2GP62487 172 aaKnown RBP eCLIP11.43□□□□□ -0.58
SCN1B-202ENST00000415950 PMS2P11Q13670 270 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 ETFRF1Q6IPR1 90 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 TMEM74BQ9NUR3 256 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 DICER1Q9UPY3 1922 aaKnown RBP11.43□□□□□ -0.58
SCN1B-202ENST00000415950 DEFB108AA8MXU0 73 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 RAB35Q15286 201 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 GTF2H5Q6ZYL4 71 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 SLC24A4Q8NFF2 622 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 MRPS24Q96EL2 167 aaKnown RBP11.43□□□□□ -0.58
SCN1B-202ENST00000415950 MRGPRX4Q96LA9 322 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 FER1L6-AS2Q96M78 137 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 VSTM2LQ96N03 204 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 SLC25A22Q9H936 323 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 ZNF275Q9NSD4 429 aaPredicted RBP11.43□□□□□ -0.58
SCN1B-202ENST00000415950 MFSD2BA6NFX1 497 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 CYR61O00622 381 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 SPINT1O43278 529 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 FPR2P25090 351 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 MNX1P50219 401 aaPredicted RBP11.43□□□□□ -0.58
SCN1B-202ENST00000415950 TAS2R45P59539 299 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 PPP1CBP62140 327 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 SSBP1Q04837 148 aaKnown RBP11.43□□□□□ -0.58
SCN1B-202ENST00000415950 MPPED2Q15777 294 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 DHRS7BQ6IAN0 325 aaPredicted RBP11.43□□□□□ -0.58
SCN1B-202ENST00000415950 PTCRAQ6ISU1 281 aaPredicted RBP11.43□□□□□ -0.58
SCN1B-202ENST00000415950 CISD2Q8N5K1 135 aaKnown RBP11.43□□□□□ -0.58
SCN1B-202ENST00000415950 MS4A10Q96PG2 267 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 S1PR3Q99500 378 aa11.43□□□□□ -0.58
SCN1B-202ENST00000415950 KIAA1324LA8MWY0 1029 aaPredicted RBP11.42□□□□□ -0.58
SCN1B-202ENST00000415950 OR5AC1P0C628 307 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 ZDHHC22Q8N966 263 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 NAT8BQ9UHF3 227 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 XKRY2A2RUG3 117 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 SFT2D2O95562 160 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 GYPAP02724 150 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 MICBQ29980 383 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 PP6455Q8WZ26 134 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 GHRLQ9UBU3 117 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 CBY1Q9Y3M2 126 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 BMPR1BO00238 502 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 MUC1P15941 1255 aaPredicted RBP11.42□□□□□ -0.58
SCN1B-202ENST00000415950 KIR3DL2P43630 455 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 SUB1P53999 127 aaKnown RBP eCLIP11.42□□□□□ -0.58
SCN1B-202ENST00000415950 RAC1P63000 192 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 LDLRAD3Q86YD5 345 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 FAM181AQ8N9Y4 354 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 OR10X1Q8NGY0 326 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 HDHD3Q9BSH5 251 aaPredicted RBP11.42□□□□□ -0.58
SCN1B-202ENST00000415950 ZNF576Q9H609 170 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 OR5AC2Q9NZP5 309 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 GREB1Q4ZG55 1949 aa11.42□□□□□ -0.58
SCN1B-202ENST00000415950 MAP1LC3B2A6NCE7 125 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 FRG2CA6NGY1 282 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 NKX6-3A6NJ46 265 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 HSPB2A8KAH6 182 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 ERVS71-1P61550 626 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 HSPB2Q16082 182 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 PNLIPRP3Q17RR3 467 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 PRSS54Q6PEW0 395 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 ZNF596Q8TC21 504 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 DYRK2Q92630 601 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 CCDC74BQ96LY2 380 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 MAP1LC3BQ9GZQ8 125 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 KCNK7Q9Y2U2 307 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 PKDREJQ9NTG1 2253 aa11.41□□□□□ -0.58
SCN1B-202ENST00000415950 OR5H15A6NDH6 313 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms