RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ADAM20O43506 726 aa17.02■□□□□ 0.31
PTPRU-203ENST00000415600 RNASE1P07998 156 aaKnown RBP17.02■□□□□ 0.31
PTPRU-203ENST00000415600 LYPD2Q6UXB3 125 aa17.02■□□□□ 0.31
PTPRU-203ENST00000415600 BCL6BQ8N143 479 aaPredicted RBP17.02■□□□□ 0.31
PTPRU-203ENST00000415600 CENPSQ8N2Z9 138 aa17.02■□□□□ 0.31
PTPRU-203ENST00000415600 GDPD1Q8N9F7 314 aa17.02■□□□□ 0.31
PTPRU-203ENST00000415600 ZDHHC16Q969W1 377 aa17.02■□□□□ 0.31
PTPRU-203ENST00000415600 DACT3Q96B18 629 aaPredicted RBP17.02■□□□□ 0.31
PTPRU-203ENST00000415600 PGAM5Q96HS1 289 aa17.02■□□□□ 0.31
PTPRU-203ENST00000415600 PBOV1Q9GZY1 135 aa17.02■□□□□ 0.31
PTPRU-203ENST00000415600 NUFIP1Q9UHK0 495 aaKnown RBP17.02■□□□□ 0.31
PTPRU-203ENST00000415600 TENM1Q9UKZ4 2725 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 TRAV8-7A0A075B6U6 113 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 LOC107986453A0A1B0GWG9 222 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 IFITM5A6NNB3 132 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 ECDO95905 644 aaPredicted RBP17.01■□□□□ 0.31
PTPRU-203ENST00000415600 PLATP00750 562 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 TTRP02766 147 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 CD2P06729 351 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 IGHV4-38-2P0DP08 117 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 ELK1P19419 428 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 PSMD7P51665 324 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 OXA1LQ15070 435 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 MICBQ29980 383 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 FAM57BQ71RH2 274 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 C19orf18Q8NEA5 215 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 CMTM3Q96MX0 182 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 ZNF391Q9UJN7 358 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 FOXJ3Q9UPW0 622 aa17.01■□□□□ 0.31
PTPRU-203ENST00000415600 FAM25AB3EWG3 89 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 FAM25CB3EWG5 89 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 FAM25GB3EWG6 89 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 P2RY10O00398 339 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 PAHP00439 452 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 FSTP19883 344 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 ZNF121P58317 390 aaPredicted RBP17■□□□□ 0.31
PTPRU-203ENST00000415600 FGF12P61328 243 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 FAM3AP98173 230 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 GFOD2Q3B7J2 385 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 METTL11BQ5VVY1 283 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 ZNF841Q6ZN19 808 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 SAMD12Q8N8I0 201 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 SGK3Q96BR1 496 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 MICU1Q9BPX6 476 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 PAPOLGQ9BWT3 736 aaKnown RBP17■□□□□ 0.31
PTPRU-203ENST00000415600 PPP1R3EQ9H7J1 279 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 SPATA2Q9UM82 520 aa17■□□□□ 0.31
PTPRU-203ENST00000415600 IGHV3OR16-10A0A075B7F0 116 aa16.99■□□□□ 0.31
PTPRU-203ENST00000415600 H3BSH0 61 aa16.99■□□□□ 0.31
PTPRU-203ENST00000415600 MUC1P15941 1255 aaPredicted RBP16.99■□□□□ 0.31
PTPRU-203ENST00000415600 IL13RA1P78552 427 aa16.99■□□□□ 0.31
PTPRU-203ENST00000415600 TRIM16LQ309B1 348 aa16.99■□□□□ 0.31
PTPRU-203ENST00000415600 SHISA2Q6UWI4 295 aa16.99■□□□□ 0.31
PTPRU-203ENST00000415600 DUX5Q96PT3 197 aa16.99■□□□□ 0.31
PTPRU-203ENST00000415600 BRD7Q9NPI1 651 aa16.99■□□□□ 0.31
PTPRU-203ENST00000415600 EXTL2Q9UBQ6 330 aa16.99■□□□□ 0.31
PTPRU-203ENST00000415600 APOA1P02647 267 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 EIF4EP06730 217 aaKnown RBP16.98■□□□□ 0.31
PTPRU-203ENST00000415600 SNRPBP14678 240 aaKnown RBP16.98■□□□□ 0.31
PTPRU-203ENST00000415600 AZGP1P25311 298 aaKnown RBP16.98■□□□□ 0.31
PTPRU-203ENST00000415600 GSK3AP49840 483 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 OR8H2Q8N162 312 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 OR13C3Q8NGS6 347 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 OR5H6Q8NGV6 325 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 ITFG2Q969R8 447 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 PCGF1Q9BSM1 259 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 MPC1Q9Y5U8 109 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 hCG_38984A0A1B0GV85 526 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 TMPRSS2O15393 492 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 TOX4O94842 621 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 MAS1P04201 325 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 CALCBP10092 127 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 IGFBP3P17936 291 aaPredicted RBP16.98■□□□□ 0.31
PTPRU-203ENST00000415600 TALDO1P37837 337 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 DEFA1P59665 94 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 DEFA3P59666 94 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 IL18Q14116 193 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 SLC9A3R2Q15599 337 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 BAK1Q16611 211 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 PYDC2Q56P42 97 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 HES5Q5TA89 166 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 TEX36Q5VZQ5 186 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 ASPHD2Q6ICH7 369 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 SLC36A1Q7Z2H8 476 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 ZNF671Q8TAW3 534 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 ZNF48Q96MX3 618 aaPredicted RBP16.98■□□□□ 0.31
PTPRU-203ENST00000415600 ZNF747Q9BV97 191 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 RTL8AQ9BWD3 113 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 KAAG1Q9UBP8 84 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 CKLFQ9UBR5 152 aa16.98■□□□□ 0.31
PTPRU-203ENST00000415600 C5orf63A6NC05 138 aa16.97■□□□□ 0.31
PTPRU-203ENST00000415600 C22orf46C9J442 243 aa16.97■□□□□ 0.31
PTPRU-203ENST00000415600 LHBP01229 141 aa16.97■□□□□ 0.31
PTPRU-203ENST00000415600 GYPAP02724 150 aa16.97■□□□□ 0.31
PTPRU-203ENST00000415600 OCMP0CE72 109 aaPredicted RBP16.97■□□□□ 0.31
PTPRU-203ENST00000415600 IL7P13232 177 aa16.97■□□□□ 0.31
PTPRU-203ENST00000415600 SCAND1P57086 179 aa16.97■□□□□ 0.31
PTPRU-203ENST00000415600 PDCD1Q15116 288 aa16.97■□□□□ 0.31
PTPRU-203ENST00000415600 P2RY14Q15391 338 aa16.97■□□□□ 0.31
PTPRU-203ENST00000415600 ZNF826PQ6ZT77 177 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms