RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 CST2P09228 141 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 SMIM6P0DI80 62 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 LIFP15018 202 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 RRADP55042 308 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 ZNF616Q08AN1 781 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 SNAI3Q3KNW1 292 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 TMEM42Q69YG0 159 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 ZNF100Q8IYN0 542 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 ZIC4Q8N9L1 334 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 TAAR9Q96RI9 348 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 ULBP2Q9BZM5 246 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 BCO1Q9HAY6 547 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 GPR173Q9NS66 373 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 FBXO7Q9Y3I1 522 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 IFITM10A6NMD0 228 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 GJE1A6NN92 205 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 ATXN7O15265 892 aaPredicted RBP8.5□□□□□ -1.05
CD44-206ENST00000415148 PPIHO43447 177 aaKnown RBP8.5□□□□□ -1.05
CD44-206ENST00000415148 SYNGR3O43761 229 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 ZIC3O60481 467 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 S100A8P05109 93 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 OR13C7P0DN81 318 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 ZNF14P17017 642 aaPredicted RBP8.5□□□□□ -1.05
CD44-206ENST00000415148 RAB5AP20339 215 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 LMO1P25800 156 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 PPP1CCP36873 323 aaKnown RBP8.5□□□□□ -1.05
CD44-206ENST00000415148 RAC1P63000 192 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 CCL7P80098 99 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 PCOLCEQ15113 449 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 OR8B8Q15620 311 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 EXT1Q16394 746 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 GUK1Q16774 197 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 KRTAP27-1Q3LI81 207 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 PRAMEF20Q5VT98 475 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 BRICD5Q6PL45 260 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 GPR137CQ8N3F9 429 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 SPEM1Q8N4L4 309 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 CCDC71LQ8N9Z2 235 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 HPSE2Q8WWQ2 592 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 RARRES2Q99969 163 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 ABHD14AQ9BUJ0 271 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 RGCCQ9H4X1 137 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 ZNF576Q9H609 170 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 PLSCR2Q9NRY7 297 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 TMED3Q9Y3Q3 217 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 VPS13AQ96RL7 3174 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 A0A1W2PQM1 296 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 ST8SIA3O43173 380 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 IGHV2-70P01814 119 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 DBHP09172 617 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 OR5AC1P0C628 307 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 STARD6P59095 220 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 TAF9Q16594 264 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 LFNGQ8NES3 379 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 M1APQ8TC57 530 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 MOB3AQ96BX8 217 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 MSI2Q96DH6 328 aaKnown RBP8.5□□□□□ -1.05
CD44-206ENST00000415148 BORCS8Q96FH0 119 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 TECTBQ96PL2 329 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 PBDC1Q9BVG4 233 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 ZNF700Q9H0M5 742 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 ZNF286AQ9HBT8 521 aa8.5□□□□□ -1.05
CD44-206ENST00000415148 IGHV1-45A0A0A0MS14 117 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 YIF1AO95070 293 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 FGF5P12034 268 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 CAMLGP49069 296 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 SULT1A1P50225 295 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 FUT6P51993 359 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 SRPXP78539 464 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 CCL20P78556 96 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 NHLH2Q02577 135 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 TMEM211Q6ICI0 200 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 GUSBP11Q6P575 273 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 C5orf24Q7Z6I8 188 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 FAM185AQ8N0U4 392 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 OSR2Q8N2R0 312 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 OR1F12Q8NHA8 337 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 CPT1CQ8TCG5 803 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 MARS2Q96GW9 593 aaKnown RBP8.49□□□□□ -1.05
CD44-206ENST00000415148 IMMP1LQ96LU5 166 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 CCDC74BQ96LY2 380 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 EIF5A2Q9GZV4 153 aaKnown RBP8.49□□□□□ -1.05
CD44-206ENST00000415148 SH2D2AQ9NP31 389 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 C19orf12Q9NSK7 152 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 METTL1Q9UBP6 276 aaKnown RBP8.49□□□□□ -1.05
CD44-206ENST00000415148 ABCA7Q8IZY2 2146 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 IGKV1-27A0A075B6S5 117 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 FAM230AA0A1W2PPH8 454 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 FAM221AA4D161 298 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 ZNF727A8MUV8 499 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 UMAD1C9J7I0 102 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 CBR3O75828 277 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 NRASP01111 189 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 OPRM1P35372 400 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 RAB1AP62820 205 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 CHAF1BQ13112 559 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 IL11RAQ14626 422 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 RHEBQ15382 184 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 SRSF7Q16629 238 aaKnown RBP eCLIP8.49□□□□□ -1.05
CD44-206ENST00000415148 RAET1LQ5VY80 246 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms