RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 SAP30LQ9HAJ7 183 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 PRDM6Q9NQX0 595 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 IGLV1-36A0A0B4J1U3 117 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 CLEC18AA5D8T8 446 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 GPR37O15354 613 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 FAM122BQ7Z309 247 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 CLEC18CQ8NCF0 446 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 OR8U1Q8NH10 309 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 PPP1R1CQ8WVI7 109 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 PFDN5Q99471 154 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 FAAP24Q9BTP7 215 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 PPIHO43447 177 aaKnown RBP10.49□□□□□ -0.73
PTPRF-205ENST00000414879 C11orf87Q6NUJ2 197 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 MRPL14Q6P1L8 145 aaKnown RBP10.49□□□□□ -0.73
PTPRF-205ENST00000414879 OR4A4PQ8NGN8 299 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 OR4S2Q8NH73 311 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 HEXA-AS1Q9H8Q6 139 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 THYN1Q9P016 225 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 ERRFI1Q9UJM3 462 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-205ENST00000414879 TRBV5-5A0A0J9YX44 114 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 SMLR1H3BR10 107 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 M0QZ24 198 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 SSSCA1O60232 199 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 GUCA2AQ02747 115 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 THNSL2Q86YJ6 484 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 SAXO1Q8IYX7 474 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 TCTEX1D1Q8N7M0 179 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 ERGIC1Q969X5 290 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 NKX2-8O15522 239 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 NDUFA2O43678 99 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 ACKR3P25106 362 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 BRS3P32247 399 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 PRSS53Q2L4Q9 553 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 TIGITQ495A1 244 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 BATF2Q8N1L9 274 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 SLC25A40Q8TBP6 338 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 PTDSS2Q9BVG9 487 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 ELOVL5Q9NYP7 299 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 TRIOBPQ9H2D6 2365 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 C3orf85A0A1B0GTC6 90 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 CCL21O00585 134 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 HAND1O96004 215 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 CFHR1Q03591 330 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 C6orf201Q7Z4U5 140 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 MDP1Q86V88 176 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 C17orf82Q86X59 251 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-205ENST00000414879 KDF1Q8NAX2 398 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-205ENST00000414879 SFT2D1Q8WV19 159 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 RBPMSQ93062 196 aaKnown RBP10.49□□□□□ -0.73
PTPRF-205ENST00000414879 C1RLQ9NZP8 487 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 AK3Q9UIJ7 227 aa10.49□□□□□ -0.73
PTPRF-205ENST00000414879 SLC6A1P30531 599 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 RPS4XP62701 263 aaKnown RBP10.48□□□□□ -0.73
PTPRF-205ENST00000414879 TAGLNQ01995 201 aaKnown RBP10.48□□□□□ -0.73
PTPRF-205ENST00000414879 CEACAM21Q3KPI0 293 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 SLC25A53Q5H9E4 307 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 APCDD1LQ8NCL9 501 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 PKIBQ9C010 78 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 PRDM14Q9GZV8 571 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 RASL12Q9NYN1 266 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 PURGQ9UJV8 347 aaKnown RBP10.48□□□□□ -0.73
PTPRF-205ENST00000414879 LSM2Q9Y333 95 aaKnown RBP10.48□□□□□ -0.73
PTPRF-205ENST00000414879 A0A1W2PN81 502 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 LOC390937A0A1W2PQ73 354 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 ADAM20O43506 726 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 TTRP02766 147 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 CHRNA7P36544 502 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 ZDHHC16Q969W1 377 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 FLVCR2Q9UPI3 526 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 SNRNP70P08621 437 aaKnown RBP10.48□□□□□ -0.73
PTPRF-205ENST00000414879 FBP1P09467 338 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 CCL17Q92583 94 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 IL19Q9UHD0 177 aa10.48□□□□□ -0.73
PTPRF-205ENST00000414879 UPK3AO75631 287 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 CST4P01036 141 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 LINC00271P0C7V0 271 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 PATE4P0C8F1 98 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 DHRS2Q13268 280 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 C9orf152Q5JTZ5 239 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 LYPD8Q6UX82 237 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 PHYHIPLQ96FC7 376 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 CXorf58Q96LI9 332 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 ALX4Q9H161 411 aaPredicted RBP10.47□□□□□ -0.73
PTPRF-205ENST00000414879 SMCO4Q9NRQ5 59 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 KCNE5Q9UJ90 142 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 ZDHHC8Q9ULC8 765 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 RP1L1Q8IWN7 2480 aaPredicted RBP10.47□□□□□ -0.73
PTPRF-205ENST00000414879 C9orf170A2RU37 121 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 MS4A18H0YCH9 400 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 RPL36A-HNRNPH2H7BZ11 118 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 ZFP36L1Q07352 338 aaKnown RBP10.47□□□□□ -0.73
PTPRF-205ENST00000414879 MS4A18Q3C1V0 323 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 TMEM91Q6ZNR0 172 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 MOB3BQ86TA1 216 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 IMMP1LQ96LU5 166 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 FYTTD1Q96QD9 318 aaKnown RBP10.47□□□□□ -0.73
PTPRF-205ENST00000414879 SOX7Q9BT81 388 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 NXF2Q9GZY0 626 aaKnown RBP10.47□□□□□ -0.73
PTPRF-205ENST00000414879 PATZ1Q9HBE1 687 aaKnown RBP10.47□□□□□ -0.73
PTPRF-205ENST00000414879 HMSDA8MTL9 139 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms