RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PLPPR2Q96GM1 343 aa13.28□□□□□ -0.28
SHMT2-202ENST00000414700 FXYD6Q9H0Q3 95 aa13.28□□□□□ -0.28
SHMT2-202ENST00000414700 GPR173Q9NS66 373 aa13.28□□□□□ -0.28
SHMT2-202ENST00000414700 OPN4Q9UHM6 478 aa13.28□□□□□ -0.28
SHMT2-202ENST00000414700 GABARAPH6UMI1 98 aa13.27□□□□□ -0.28
SHMT2-202ENST00000414700 UBBP0CG47 229 aa13.27□□□□□ -0.28
SHMT2-202ENST00000414700 RPS27AP62979 156 aaKnown RBP13.27□□□□□ -0.28
SHMT2-202ENST00000414700 UBA52P62987 128 aaKnown RBP13.27□□□□□ -0.28
SHMT2-202ENST00000414700 SLC22A25Q6T423 547 aa13.27□□□□□ -0.28
SHMT2-202ENST00000414700 LRP11Q86VZ4 500 aa13.27□□□□□ -0.28
SHMT2-202ENST00000414700 BPIFCQ8NFQ6 507 aa13.27□□□□□ -0.28
SHMT2-202ENST00000414700 OR1M1Q8NGA1 313 aa13.27□□□□□ -0.28
SHMT2-202ENST00000414700 OR52N4Q8NGI2 321 aa13.27□□□□□ -0.28
SHMT2-202ENST00000414700 OR4D10Q8NGI6 311 aa13.27□□□□□ -0.28
SHMT2-202ENST00000414700 PIGCQ92535 297 aa13.27□□□□□ -0.28
SHMT2-202ENST00000414700 ANXA7P20073 488 aaKnown RBP13.27□□□□□ -0.29
SHMT2-202ENST00000414700 THBS4P35443 961 aa13.27□□□□□ -0.29
SHMT2-202ENST00000414700 NCMAPQ5T1S8 102 aa13.27□□□□□ -0.29
SHMT2-202ENST00000414700 TMEM42Q69YG0 159 aa13.27□□□□□ -0.29
SHMT2-202ENST00000414700 SSX8Q7RTT4 187 aa13.27□□□□□ -0.29
SHMT2-202ENST00000414700 OR52I2Q8NH67 350 aa13.27□□□□□ -0.29
SHMT2-202ENST00000414700 LGALS14Q8TCE9 139 aa13.27□□□□□ -0.29
SHMT2-202ENST00000414700 TMEM171Q8WVE6 324 aa13.27□□□□□ -0.29
SHMT2-202ENST00000414700 SLITRK2Q9H156 845 aa13.27□□□□□ -0.29
SHMT2-202ENST00000414700 CGGBP1Q9UFW8 167 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-202ENST00000414700 TACC2O95359 2948 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 UBE2QL1A1L167 161 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 WIPF3A6NGB9 483 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 ZNF850A8MQ14 1090 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 F5H5P2 479 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 SIGLEC5O15389 551 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 SULT1B1O43704 296 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 IFNA4P05014 189 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 RAC2P15153 192 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 RPA2P15927 270 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 CLDN12P56749 244 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 GMFBP60983 142 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 CRIP3Q6Q6R5 217 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 DMRTC2Q8IXT2 367 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-202ENST00000414700 CMTM4Q8IZR5 234 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 OR10K1Q8NGX5 313 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 ZNF671Q8TAW3 534 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 PP6455Q8WZ26 134 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 NEUROG1Q92886 237 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 PIGTQ969N2 578 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 C10orf35Q96D05 121 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 HS3ST6Q96QI5 342 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 PAPOLGQ9BWT3 736 aaKnown RBP13.26□□□□□ -0.29
SHMT2-202ENST00000414700 OPA3Q9H6K4 179 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 NGBQ9NPG2 151 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 MYEF2Q9P2K5 600 aaKnown RBP13.26□□□□□ -0.29
SHMT2-202ENST00000414700 V9GY05 133 aa13.26□□□□□ -0.29
SHMT2-202ENST00000414700 ZNF816-ZNF321PA0A0X1KG74 233 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 ANKRD20A5PA0PJZ0 165 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 NDUFB6O95139 128 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 SPDEFO95238 335 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 PLAUP00749 431 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 NRASP01111 189 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 RLN2P04090 185 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 GLRXP35754 106 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 FAM209BQ5JX69 171 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 HES5Q5TA89 166 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 UNQ6126/PRO20091Q6UXV3 157 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 CCDC54Q8NEL0 328 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 HAVCR1Q96D42 359 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 GINS4Q9BRT9 223 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 TMEM138Q9NPI0 162 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 RASL12Q9NYN1 266 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 TAS2R3Q9NYW6 316 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 IFITM5A6NNB3 132 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 DEFB108AA8MXU0 73 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 SHISA9B4DS77 424 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 ATG12O94817 140 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 BDKRB2P30411 391 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 MICBQ29980 383 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 HAGHLQ6PII5 290 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-202ENST00000414700 LYPD6Q86Y78 171 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 FCAMRQ8WWV6 532 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 FGF23Q9GZV9 251 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-202ENST00000414700 BARX1Q9HBU1 254 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-202ENST00000414700 DUSP13Q9UII6 198 aa13.25□□□□□ -0.29
SHMT2-202ENST00000414700 CACNA1DQ01668 2161 aa13.24□□□□□ -0.29
SHMT2-202ENST00000414700 CA6P23280 308 aa13.24□□□□□ -0.29
SHMT2-202ENST00000414700 MRPS10P82664 201 aaKnown RBP13.24□□□□□ -0.29
SHMT2-202ENST00000414700 PRDX4Q13162 271 aa13.24□□□□□ -0.29
SHMT2-202ENST00000414700 ZNF718Q3SXZ3 478 aa13.24□□□□□ -0.29
SHMT2-202ENST00000414700 MBNL2Q5VZF2 373 aaKnown RBP13.24□□□□□ -0.29
SHMT2-202ENST00000414700 UQCC3Q6UW78 93 aa13.24□□□□□ -0.29
SHMT2-202ENST00000414700 JAGN1Q8N5M9 183 aa13.24□□□□□ -0.29
SHMT2-202ENST00000414700 SSC4DQ8WTU2 575 aa13.24□□□□□ -0.29
SHMT2-202ENST00000414700 HPSE2Q8WWQ2 592 aa13.24□□□□□ -0.29
SHMT2-202ENST00000414700 ASB13Q8WXK3 278 aa13.24□□□□□ -0.29
SHMT2-202ENST00000414700 SYT3Q9BQG1 590 aa13.24□□□□□ -0.29
SHMT2-202ENST00000414700 USP9YO00507 2555 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-202ENST00000414700 CENPEQ02224 2701 aa13.24□□□□□ -0.29
SHMT2-202ENST00000414700 HCKP08631 526 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 IGFBP2P18065 325 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 PVALBP20472 110 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-202ENST00000414700 GCH1P30793 250 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 H2BFSP57053 126 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms